Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4094g00001 ATGGAAGAAGACTCCAAAAGCTCCAGCGAAGAAATTGATCGATCCTCTGAACACAATAATGATGAGATGGGAACTGGCAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGCTTCACAACTGCACAGGCTTTGGGGGGACACATGAACATACACAGAAAAGATAGAGCCAACAAGGCCAAACCCAATTTTCCTCCTTCGAGTTCCACCAAGGTTGATGAGAGTACTCACTATGCAGATCTCGGGTTCTATAATCCAAGCTATGCTGTCAGAGGGAATTGTTATTCCACTCTTCATCCTGATCGAGAGGTAGACACTAATTACAATTACTACCATCAATTATATTTTCCCTCACACCCATGCGGTGCCAAATCACCTTCACATGTACACTATAGTGAGGTTTTGTGTGTAGAGAACCAAAGGGATCCTCAGCTTCTGTTTGGACAAGATTGGAGGCAAAGGGGTTTAAGTTTGTACACTAATCCATTATGTGTACATGAAAATAAAGACAAGATAGAAAGCAACAGTGAAGAGGACGATCTGGATTTGGAGCTTAGACTTGAGATGAGCTGCAAGTTGGAAGCAGAAAGAAGCAAGATTCAAGGAAGGTTGCAAGCTTTTGAGGAAGGTACTCAAGAT 636 0.4277 MEEDSKSSSEEIDRSSEHNNDEMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANKAKPNFPPSSSTKVDESTHYADLGFYNPSYAVRGNCYSTLHPDREVDTNYNYYHQLYFPSHPCGAKSPSHVHYSEVLCVENQRDPQLLFGQDWRQRGLSLYTNPLCVHENKDKIESNSEEDDLDLELRLEMSCKLEAERSKIQGRLQAFEEGTQD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4094g00001 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Mupr4094g00001 212 SUPERFAMILY beta-beta-alpha zinc fingers 27 56 IPR036236 -
Mupr4094g00001 212 Pfam C2H2-type zinc finger 29 53 - -
Mupr4094g00001 212 PANTHER OS07G0101800 PROTEIN 1 188 - -
Mupr4094g00001 212 MobiDBLite consensus disorder prediction 1 23 - -
Mupr4094g00001 212 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Mupr4094g00001 212 Gene3D Classic Zinc Finger 4 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4094g00001 Mupr-Chr4094 830 1606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4094g00001 29 83 C2H2 Transcription Factor Family AT5G43540 61.404 8.23e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4094g00001 zf-C2H2_6 1.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4094g00001 - - ccaj:109812060 314.309