Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4092g00002 ATGTTAGAAAAGAAAAAAAAATCCAAACGAGTAAGTTTTGTTTTTGTAATTATTCAACAATTCAACAATGTCCACCGCTCCCGCTCCGTCTTCGCCTCCAGCCGCCAACGGCACTGCGCCTTCGCCATCAACTCCGGCCACGCCTTCCGCACCACCGCCATCCACACCTTCTTCGCCGCCTCCTGCGACTCCGTCCTCTCCGCCGCCGGCAACTCCGTCGTCTCCTCCGCCGGCGACTCCCTCCGCACCTCCTCCGGCGACTCCTTCATTGCCACCTCCGGCGACTCCATCCGCTCCTTCACCGGCCACTCCCTCTTCTTCTCCGCCGCCTCCCGCCACGCCGTCAACCTCTCCACCGTCGCCGCCGTCGACCTCACCGCCGACGCCTCCCAGTGGCGGAAACACTCCGAGTCCACCGTCTCGGAGCTCGCCATCTCCACCGTCCGGATCGAACCGGACCACGCCGTCCTCGCCGTCTCCGCCGTCATCTTCTTCGTCGAGTATTTCGACCGGCGTGGTTGTCGGAATCGCCGTCGGTGCTGTCGCGGTTCTGCTCGTGTTGAGCATTCTCTGCGTATGCTGTCGGAAGAAAAAGAGAAGACGCGACGAAGAGTACTATGGTCAGCCGCCACCGCAGCAACCGCCGCGGGGACCCAAGGTCTAATGATAATTACTCATTTCATGATTTGTTCACAATTTTTAGAGGATCCATATGGTGGTCCTCCACGGCAATGGCAGCACAATGCTCCTCCTCCTCAAGATCACGTGGTCTCAATGATGCCTCCTAAGCCATCGCCTGCACCTGCTCCGCCAGCTTATGTTGCTCATCCTCCCCCACCACCGCCTCCTTTCATGAGCAGCAGCGGTGGATCTGGATCAAACTATTCAGGAGGTGAACCACTTCCTCCTCCTTCTCCAGGAATTGCGTTGGGCTTCACAAAGAGTACATTCACATACGAGGAGTTGGCGCGCGCAACGGATGGCTTCTCCAATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAGAGGAATCCTTCCCAATGGCAAAGAGGTGGCAGTGAAGCAATTGAAGGCTGGAAGTGGGCAAGGGGAGCGTGAGTTCCAAGCTGAAGTTGAGATAATTAGCCGTGTCCATCACAAGCATCTTGTGTCTTTGGTTGGATACTGCATCACTGGGTCCCAGAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACATTGGAATTCCATTTGCATGGTCATCCCAAGATCATCCATCGTGATATCAAAGCTGCCAACATCCTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTTGCCAAGTTTTCTTCTGATGTCAACACTCATGTTTCTACTCGAGTGATGGGGACTTTTGGGTATCTGGCCCCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTCTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACTGGACGGCGGCCAGTTGATAAAACTCAAACTTTCATGGAGGATAGCTTGGTAGAGTGGGCTAGGCCTTTGCTCACGCGTGCTTTGGAAGAGGATGATTTTGATTCTATTATTGACCCAAGGCTCCAAAATGACTATGATCCTCATGAGATGTCACGAATGGTGGCTTGTGCTGCGGCTTGCACACGTCATTCGGCAAAGCGTCGACCAAGAATGAGCCAGGTTGTCCGTGCACTGGAAGGAGATGTGTCTCTAGCAGATCTTAACGAAGGAGTCAGACCTGGACACAGCACTATGTACAGTTCTCATGAAAGCTCAGATTATGACACTGTACAGTACAAAGAAGACATGAAAAAGTTCAGAAAAATGGCATTGGGAACTCAGGAGTATGGTGCCAGCAGTGAGTACAGTGCAGCTACAAGTGAGTATGGTTTAAATCCATCTGGTTCAAGCAGTGAAGCACAGAGCCGTCAAACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAACAGTCAAGCTTTTAGTGTTGTTTAA 2019 0.5171 MLEKKKKSKRVSFVFVIIQQFNNVHRSRSVFASSRQRHCAFAINSGHAFRTTAIHTFFAASCDSVLSAAGNSVVSSAGDSLRTSSGDSFIATSGDSIRSFTGHSLFFSAASRHAVNLSTVAAVDLTADASQWRKHSESTVSELAISTVRIEPDHAVLAVSAVIFFVEYFDRRGCRNRRRCCRGSARVEHSLRMLSEEKEKTRRRVLWSAATAATAAGTQGLMIITHFMICSQFLEDPYGGPPRQWQHNAPPPQDHVVSMMPPKPSPAPAPPAYVAHPPPPPPPFMSSSGGSGSNYSGGEPLPPPSPGIALGFTKSTFTYEELARATDGFSNANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKTQTFMEDSLVEWARPLLTRALEEDDFDSIIDPRLQNDYDPHEMSRMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGVRPGHSTMYSSHESSDYDTVQYKEDMKKFRKMALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMKNNSQAFSVV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4092g00002 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Mupr4092g00002 672 SUPERFAMILY Protein kinase-like (PK-like) 315 575 IPR011009 -
Mupr4092g00002 672 MobiDBLite consensus disorder prediction 255 286 - -
Mupr4092g00002 672 Pfam Protein kinase domain 413 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4092g00002 672 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Mupr4092g00002 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 417 638 IPR047117 -
Mupr4092g00002 672 MobiDBLite consensus disorder prediction 630 672 - -
Mupr4092g00002 672 SMART serkin_6 329 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4092g00002 672 MobiDBLite consensus disorder prediction 241 307 - -
Mupr4092g00002 672 ProSiteProfiles Protein kinase domain profile. 329 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4092g00002 672 Gene3D Phosphorylase Kinase; domain 1 311 404 - -
Mupr4092g00002 672 FunFam proline-rich receptor-like protein kinase PERK8 409 588 - -
Mupr4092g00002 672 FunFam proline-rich receptor-like protein kinase PERK1 307 404 - -
Mupr4092g00002 672 Gene3D Transferase(Phosphotransferase) domain 1 411 584 - -
Mupr4092g00002 672 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4092g00002 Mupr-Chr4092 12071 16737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4092g00002 284 655 Trihelix Transcription Factor Family AT1G70460 54.613 6.99e-137 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mupr4092g00002 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4092g00002 - - gmx:100781944 745.347