Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4089g00016 ATGGAGTCAGATCTCGAGCAACAGCCGCAGGTAAATCCTTCGGGTTTGACGCGGTACCGATCAGCACCGAGTTCTTACTTCTCAAACATCATCGACAGGGAGTTCTATGAGCACATTTTCAACCGGCCATCGAGTCCCGAAACAGAGCGAGTCTTCTCAGGCTTCATGAATAGCTTAAGCGGCGACGGAGCAGAAGATTCGCTCCATCAGAAACTCTCAACGGATTCCGCAGTCAAGGAAGAGGTTAACCAACAGGAGCAGGGTACGAACGAGGAGGAACACGTGGCGCTTCAGGAGAGTAATAATTATAACTCCGCTTCTCATAATTTCTACCAAACCTCCTCCTCCTCTTCCAAACCTCCTTTGCCGAACCAGAACCAGAACCAGAACCTGAACCAGAACCAGAACCTTTCCTCAGGTATGGAACAAGGAACGTATTCAATGGGACTCAGGCATAGCAGTGGAAACAATTCTACCCTTATCAGGCATAGTAGCTCACCGGCTGGACTATTTTCACAAATAAACATTGAAAATGGTACGTCCTATGTTCACTTTATTTATTTGCTAAAAGTGTATGCTGGTGTGAGAGGCATGGGGACTTTAGGGGCTGTTAATAACAGTGTCCAAGAACCCAAATTTTCTACTTCCAGGAGGTTGAAGAATCAACCAAACTATTCGTCGGGGCGAATGTCGTCCATAGCTGAAATTGGGGACAAAGGGAATAGAGAAACTAGTCCAGACAATGAAGCTTTTGCTGATGCCAACGATTTTATGACTGGTTTCCAAGTTGGTCAGTGGGATGATTCTGCAATCATGTCCGACTCTGTTGCTGGTCTCAAAAGATTTAGAGAAAACGATGCAAAATCATTTTCTGCCTTAAATGCAGCTGAGTCTCAGAATGAAACGGGACAGTCTCCTGCTCCTTTGGCCCATCACTTGAGTTTGCCGAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTTCTGCAGTTTTCAGATTCTGTTCCGTGCAAAATTCGTGCCAAGCGGGGCTGTGCTACTCACCCAAGAAGCATTGCTGAGAGGGTTAGGAGAACTAAAATTAGCGAGCGTATGAGAAAACTTCAAGATCTTGTCCCAAACATGGACAAGCAAACTAACACATCAGATATGTTGGACTTGGCCGTGGATTACATCAAAGACCTTCAAAAGCAAGTTCAGACTGTCATGCCAAGTGCACGTGCTCACACGAGAAGCAACAATAACGGCAAAAAGGGTGATTGGGCGATTCAGCTTGTGTTGGTATACCCGTTGAAATTGAAAAGAGCGAGTTCAATGCTCCAGAAGCAGCAACAATTTCTTGCTATTGGGAAAACCAACGTACCGTTTCGGTTTCGGCACAGGAACACGGGGGGCCGAGACAGACATGGTTTCGTTAGTGAGCTTTACCGTTTACCGTTTATCTCACCTTTTTTTCCCCCTCGAGTTGTGTTCGATAAAGTCAATTCGATGGCTGTCATATCCATTTTGGGGGTTCATTTTTATGAATGGTGGCTGTGCATTGTTATCATGACGATTTTTTTTTTGGATGCTATCTATAACCAATTTGGATTCGACTACTCTAGTTTAATAAATGATAACTCTGATGATGTGAATACAAATTTCAACTTATGCTGCATGTTTGCTTAA 1668 0.4442 MESDLEQQPQVNPSGLTRYRSAPSSYFSNIIDREFYEHIFNRPSSPETERVFSGFMNSLSGDGAEDSLHQKLSTDSAVKEEVNQQEQGTNEEEHVALQESNNYNSASHNFYQTSSSSSKPPLPNQNQNQNLNQNQNLSSGMEQGTYSMGLRHSSGNNSTLIRHSSSPAGLFSQINIENGTSYVHFIYLLKVYAGVRGMGTLGAVNNSVQEPKFSTSRRLKNQPNYSSGRMSSIAEIGDKGNRETSPDNEAFADANDFMTGFQVGQWDDSAIMSDSVAGLKRFRENDAKSFSALNAAESQNETGQSPAPLAHHLSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQKQVQTVMPSARAHTRSNNNGKKGDWAIQLVLVYPLKLKRASSMLQKQQQFLAIGKTNVPFRFRHRNTGGRDRHGFVSELYRLPFISPFFPPRVVFDKVNSMAVISILGVHFYEWWLCIVIMTIFFLDAIYNQFGFDYSSLINDNSDDVNTNFNLCCMFA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4089g00016 555 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Mupr4089g00016 555 Gene3D - 346 418 IPR036638 GO:0046983
Mupr4089g00016 555 MobiDBLite consensus disorder prediction 1 20 - -
Mupr4089g00016 555 MobiDBLite consensus disorder prediction 212 231 - -
Mupr4089g00016 555 MobiDBLite consensus disorder prediction 77 161 - -
Mupr4089g00016 555 MobiDBLite consensus disorder prediction 212 232 - -
Mupr4089g00016 555 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 403 IPR036638 GO:0046983
Mupr4089g00016 555 SMART finulus 351 401 IPR011598 GO:0046983
Mupr4089g00016 555 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 415 - -
Mupr4089g00016 555 MobiDBLite consensus disorder prediction 62 161 - -
Mupr4089g00016 555 Pfam Helix-loop-helix DNA-binding domain 350 396 IPR011598 GO:0046983
Mupr4089g00016 555 FunFam Transcription factor bHLH130 family 346 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4089g00016 Mupr-Chr4089 114483 117283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4089g00016 14 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.084 8.73e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4089g00016 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4089g00016 - - gmx:100805812 588.186