Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4089g00012 ATTCTACATTTTCAATGCATTAAGTTGGTGTATTGTTTACTGGAACAGCTAAAGACATGGAAGCTGGAAAAGGGAGCCGTCAAGTTCTTGGAGACATTGGGCCAATTACAAGGTCCTCCAATATTTAGTGAATTTGTCCCTGATGAATTGCAGAATCTGGTACAGAACCTTGGTGTACCTGCACTAGACAATAAAGCAAATGTTTACCAGGAACACAGTGCAGAAGATTTATCTCACATGCCAAATCCTGAGCCCGTAGATATGGTTAGTTCTGAAGTTGTAGAAAGGGTTAAATTTGTTTGTGAAAGAAAGTCAAAAGAAAGATCTTGTAGGAATGTCAAGACACTGACTGCAGAAATTACTGCACAAAGCAAGGAAGCTTGCGGAGTATTGATTGAAACTGAGTATGAACCTGAGGCTGTTGACATTGATGCAGATGATCCTAATGAACTGGCAGTAGCCGAATACATTGACGACATATACAGATTCTTTAAGCAAACCGAGGTACCCAATATTCTCATATCTAATGCCTTTCATTGCTATTTCTTCATTTCATTAATGCAATTTAGGATGCAGGAGGAGAGACAGTATCGAGTTTCAGATTACATGAATTCACAGCATGGTATTAATGAGATGATGAGATCTATTATGGTGGACTGGCTAGTTGAGACCCACATGAGATTTAAATTGATGCCCGAGACCCTGTATCTTACGGTAAACCTAATAGATCGGTACCTCTCATCAACATTTGTGCCTAAAGAAGAAATACAGTTGTTGGGCATAAGCTCAATGCTCATAGCTTGCAAATATGAAGAGACCAAGCCTATTCGGGTTAAAGACTTGATTAGCATATCAGATAACGCTTACTCCAAAAACCAGATCCTTTCGATGGAGAAAGCAATTCTGGAGAAGTTAAAATGGCATTTAACTGTTCCTACCCCCTACGTCTTCTTAATTAGATTACTAAAACTTTCTGATGAAAGAGATCAGCAGATGGAGAACATGGTATTCTTCCTAGCCGAACTTAGTCTCGTGCACTATAAAACCGCAATTTCGTTCCTCCCTTCAATGAGAGCCGCAGCTGCTATCTATGCAGCTCGCTGCACACTCAATAGAAGGCCCTTCTGGAATCAAATTTTGAAGCACAAAGCAGGCTACACCGCACAAGAATTAAGAGATTGTGCAAAGCTTCTAGTTAGGTTACACTCGAATGCTCCAGGCAGTGTTGTGAAGACAGTTTACAAGAAATTCTGTAGTTTAGAGAAAGGAGGTGTTGCACTTTTGTCTCCACCGCAACACATAGAAAAACATTTATAG 1317 0.4002 ILHFQCIKLVYCLLEQLKTWKLEKGAVKFLETLGQLQGPPIFSEFVPDELQNLVQNLGVPALDNKANVYQEHSAEDLSHMPNPEPVDMVSSEVVERVKFVCERKSKERSCRNVKTLTAEITAQSKEACGVLIETEYEPEAVDIDADDPNELAVAEYIDDIYRFFKQTEVPNILISNAFHCYFFISLMQFRMQEERQYRVSDYMNSQHGINEMMRSIMVDWLVETHMRFKLMPETLYLTVNLIDRYLSSTFVPKEEIQLLGISSMLIACKYEETKPIRVKDLISISDNAYSKNQILSMEKAILEKLKWHLTVPTPYVFLIRLLKLSDERDQQMENMVFFLAELSLVHYKTAISFLPSMRAAAAIYAARCTLNRRPFWNQILKHKAGYTAQELRDCAKLLVRLHSNAPGSVVKTVYKKFCSLEKGGVALLSPPQHIEKHL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4089g00012 438 Gene3D - 304 437 - -
Mupr4089g00012 438 SUPERFAMILY Cyclin-like 313 433 IPR036915 -
Mupr4089g00012 438 SMART Cyclin_C_2 312 431 IPR004367 -
Mupr4089g00012 438 SUPERFAMILY Cyclin-like 186 307 IPR036915 -
Mupr4089g00012 438 PANTHER CYCLINS 117 416 IPR039361 -
Mupr4089g00012 438 FunFam G2/mitotic-specific cyclin 198 310 - -
Mupr4089g00012 438 Pfam Cyclin, N-terminal domain 189 309 IPR006671 -
Mupr4089g00012 438 Pfam Cyclin, C-terminal domain 312 430 IPR004367 -
Mupr4089g00012 438 Gene3D - 199 303 - -
Mupr4089g00012 438 SMART cyclin_7 316 400 IPR013763 -
Mupr4089g00012 438 SMART cyclin_7 219 303 IPR013763 -
Mupr4089g00012 438 ProSitePatterns Cyclins signature. 214 245 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4089g00012 Mupr-Chr4089 87627 89666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4089g00012 105 428 Core Cell Cycle Gene Families AT2G26760 44.923 2.14e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4089g00012 K21777 - jre:109013760 365.925