Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4084g00003 ATGGGTGAGGTTTCGGAAGATGGTTCCGCTGATTGTTTCAGCCAGATGATGTCGTCGATGCCGGGTTTTCGGTTCCATCCCACGGATGAGGAGTTGGTGATGTACTATCTCAAGCGGAAGATTTGTGGGAAGAAGCTGAAGCTGAACGTGATTCGTGTAACCGATGTGTATAAGTGGGATCCTGAGGATTTGCCTGGGCAATCTATTCTGAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCACAGAGATAGGAAGTATCCTAATGGTGCAAGGTCTAACCGGGCAACTAGACATGGGTACTGGAAAGCAACAGGAAAGGATCGCAATGTGATTTGCAATTCTAGGACAGTTGGAGTGAAGAAGACCCTGGTTTTCTATTTGGGCAGAGCTCCTAGTGGTGAGAGGACTGACTGGGTTATGCATGAATACACCGTGGATGAAGAGGAGCTGAAGAGATGCCAGGACGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGACATAGTAGATTTTAGTAATAAGACAGCTGAACAGGAGGTTCCAAATTGTGTTTCTCCGATTGTTAATGATGTACCACCGTTTTTGTTTGATGATGAAATCAACGACATCATTAGAGGAATGTTGGATGATGAACTTATCCCGGACCAGCAGCATGGGAATCTTGACTTTCCTCAGGCTGTTACAGAAGAAACACAAAGTACTGTTGTGGATCAGTTCTCCGAGTCTGTGATGTTCTCTGAGCCAAGCAAAAACTTATATTCTAGCAGTCAATTTTTTGATGCGCAGCCTGGCTTTGACTTCAATCTGCCAGTTGCTTCTCATTTGCATCTTTCTGAAGCATCTGAGGTCTCTTCTGCTTCCAACATTAAAACAAAGGGGCTTGACTTTCAAGAGGATGGCTTCTTGGAAATTAATGATCTCATTGATACTGAGCCTACATTGTCAAATGTGGAAAAGCCTGTGGAGTACCTGCAGTATGAAGATGGGTTAAGTGAACTTGATCTGTTCCAAGATGCTGAGATGTTTCTTCGTGATTTGGGGCCAATTATTCACGAAACAAATTCACATGCATATACAAATGCCCTTGTCAGCAGCTGTATTGAAAGTCAAAATTACCAGTTGCTGCACAATCCAGAGGATGCCAATCAAACTGTTGGTGAATTGTGGATGCATGGTGAAAGAAGCACCCCGTGTCCATCAGAAGGCTTTGTTGATTCTTTCTCGGTATCATCCCCAGGTGTTGTATATGAATCTGTCAGCTTTCCTACGGAAGGCAATAACAATCAAAGTAGCACTATGGAAGATGTTGCTACAAATAGCTTCTCCTCTGCTCTCTGGGCCTTTGTTGAATCAATACCTACTACTCCTGCATCAGCTGCTGAAAATGCTTTGGTGAACCGAGCTTTGAATCGAATGTCTAGCTTCAGCAGGGCGAAGATTAAGCCCACAAACATTGCTGCAGCAGGTAAAGACACTGCCACTTTGAAGAGAGCCGGCAGAAAGGGACTTCCATTCCTTTTTTTCCCGATTCTTATTGCTTTATGTGCTTTCTTGTGGATTTTTATTGGAAACTTAAGATTATTAGGGAGATGTATCTCTCCTTAA 1683 0.4314 MGEVSEDGSADCFSQMMSSMPGFRFHPTDEELVMYYLKRKICGKKLKLNVIRVTDVYKWDPEDLPGQSILKTGDRQWFFFCHRDRKYPNGARSNRATRHGYWKATGKDRNVICNSRTVGVKKTLVFYLGRAPSGERTDWVMHEYTVDEEELKRCQDVKDYYALYKVFKKSGPGPKNGEQYGAPFNEEEWADDDIVDFSNKTAEQEVPNCVSPIVNDVPPFLFDDEINDIIRGMLDDELIPDQQHGNLDFPQAVTEETQSTVVDQFSESVMFSEPSKNLYSSSQFFDAQPGFDFNLPVASHLHLSEASEVSSASNIKTKGLDFQEDGFLEINDLIDTEPTLSNVEKPVEYLQYEDGLSELDLFQDAEMFLRDLGPIIHETNSHAYTNALVSSCIESQNYQLLHNPEDANQTVGELWMHGERSTPCPSEGFVDSFSVSSPGVVYESVSFPTEGNNNQSSTMEDVATNSFSSALWAFVESIPTTPASAAENALVNRALNRMSSFSRAKIKPTNIAAAGKDTATLKRAGRKGLPFLFFPILIALCAFLWIFIGNLRLLGRCISP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4084g00003 560 FunFam Nac domain-containing protein 86 28 172 - -
Mupr4084g00003 560 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Mupr4084g00003 560 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Mupr4084g00003 560 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Mupr4084g00003 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 266 - -
Mupr4084g00003 560 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4084g00003 Mupr-Chr4084 15675 19342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4084g00003 7 558 NAC Transcription Factor Family AT1G34190 43.271 1.05e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr4084g00003 NAM 8.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4084g00003 - - gmx:100794925 947.577