Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4054g00001 ATGCAATCTCAAACTTCAGATACGTTTCCCTCCCACAATGGCAATGACCCAATTTCCTATTATGACCCAGCATTTCACTACAGGCCCTTTTCCATTGACTCTGAAAGCAACCCAACATCAAAACAAGAAAACAACCGTGACCTTCCTTCTCCCCCTCCTTTGTCCTTTTTCCACTTTCCCTCTCCTCCCTTTGAAGACCCTCAAATTTTCCTCGAACAACACCACGATTTCCTCCTTCAGTTTCTTCCTCAGCCTCTCCCTCAGGGCCCTGACCCTCAACCTATTGATGATGCCATTGGCATGGAGGCTTCTATCAAAACCAGTGATCAGATCCCGAGAAAAAGACCTGGCAAGAAAGATAGGCACAGCAAGATCAACACCGCAAGAGGACTGAGGGATCGGAGAATGAGACTTTCTCTTGAAGTGGCAAAGAGGTTTTTCGGGTTGCAAGACATGCTAGGCTTTGACAAAGCTAGCAAGACCGTGGAGTGGTTGCTAAACCAAGCAAAAGTGGAAATCAATCGTCTAGCAAAAGAGAAAAAAAGGAAGAAGAAGAATAGTGATCACAATTGTAGCAGTGCTGGGGCCAAGAGTGCTTCTTCGAGTTCAGAATGTGAAGAAGGTGTTTCTAGTCTTGATGAGGTTGTGGTGAGTGGAGATCAAGAACAGGAAGAAGAGAAGGTGAAGAAAGTTGTGAAGAGAAGAGTCAAGCATTGTAGGAAGATCAGTGCATTCCACTCTCGTGCAAAGGAGTTCAGGGAAAGGGCAAGAGAAAGGGCAAGAGAGAGGACAAGAGAAAAGATGAGAAGTCGTGGACTAGCTGATGAATCAAAGCAATGTAGAGAGGAAAAAAATCAAGATCTGACCCAATTGGATTCATGGAACCCCTTCCAAACTGGAGAAGAATATGGTACCAAAAGCCATACTGTGCATCCTTCCTTGGACGTGATCACTCAGGCTAAAGAACAAAGCTACCACGCAAAGGAACATTTGGGAACTGCAGAGGCCATGGCGCTTAGTGATGATTCTTTGGTTGTTTTTAGCAAATGGAGCCCCTCCTTGTTCTTCAATAACTCTGGATTCTCTCAAGAAAATTTCAGTCCTTGGGAAAACCATGGGAGGCCTAAAACAATCACATCCCATATCTTCGATGTGCCGACAGAAATGCGCAAGCCTGCTATACAAGCCTCTCTTGATATAATTAGGCTGTTGGACTTAATTAAGGTTATTGTAACACAACTTTGCTGTTTGCAGAACTTGGAGTTGTTATATCATTTGAGTTTTGATACCATGATGGCCGCTAGCTAG 1308 0.4434 MQSQTSDTFPSHNGNDPISYYDPAFHYRPFSIDSESNPTSKQENNRDLPSPPPLSFFHFPSPPFEDPQIFLEQHHDFLLQFLPQPLPQGPDPQPIDDAIGMEASIKTSDQIPRKRPGKKDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEINRLAKEKKRKKKNSDHNCSSAGAKSASSSSECEEGVSSLDEVVVSGDQEQEEEKVKKVVKRRVKHCRKISAFHSRAKEFRERARERARERTREKMRSRGLADESKQCREEKNQDLTQLDSWNPFQTGEEYGTKSHTVHPSLDVITQAKEQSYHAKEHLGTAEAMALSDDSLVVFSKWSPSLFFNNSGFSQENFSPWENHGRPKTITSHIFDVPTEMRKPAIQASLDIIRLLDLIKVIVTQLCCLQNLELLYHLSFDTMMAAS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 257 286 - -
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 1 15 - -
Mupr4054g00001 435 ProSiteProfiles R domain profile. 250 267 IPR017888 -
Mupr4054g00001 435 Coils Coil 166 186 - -
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 177 206 - -
Mupr4054g00001 435 ProSiteProfiles TCP domain profile. 118 176 IPR017887 -
Mupr4054g00001 435 Pfam TCP family transcription factor 117 270 IPR017887 -
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 1 59 - -
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 32 49 - -
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 108 129 - -
Mupr4054g00001 435 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 108 308 IPR005333 GO:0003700
Mupr4054g00001 435 MobiDBLite consensus disorder prediction 191 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4054g00001 Mupr-Chr4054 14691 20239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4054g00001 9 264 TCP Transcription Factor Family AT3G18550 35.862 4.28e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr4054g00001 TCP 4.3e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4054g00001 - - pvu:PHAVU_009G200600g 427.943