Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4050g00003 ATGCCCCTCTCTCCCTCTTCCATGGCTTCGATCCCACAGTTCTATCCAAACTACACGTTCACTACTCACGATCTTTCGGAGTTCCCTACCCCACTCAGTGCTAACAACTCGGTTATGGACAACACCGTTTGGGGTGCTCAAGATGGCTTGATTCCCGTGATTGATATCAATAATGGCGCACTTGATCATATTGTGTCACTTGATTGTGATGCCATGGCTTGTGCTAATTGGATGCCATCTTTTTCTGAGCAACTCGGTGGGCTTTCGGACTTGGCCATTTCGGACTGCAAAATGGGATTCTATGGAGGGTTTCAGAATTTCAACAGCAGATATCAACCTCATGTTGGTGAGTTTGGAGAAGAATGTTGTGGGTTTGTGGAGGATATTAAACCACCTGCTTATCCTAATACTGCCAGAGAAAATTGGGGAATTCAAGGCAATCAAATGCAAGCAGTTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGGAAAACCCTAGCTGATCGGCGAGTGAGAGTCAGGGGAAGGTTTGCAAGAAACAATGAGCTATGTGAAGAAGATATGGCAACAAAAAAGCACGAGAATCACAAAGAAGACTTTTACGGTGGCGATTCAATCCACTTCCAGTTAAAGAATGATGAGGAGGACTGGCTACAAGAGGCCATGGCAAGTCTAGTCTATTTATCCCATTCTTCACCAGAAGATATGTAA 798 0.4323 MPLSPSSMASIPQFYPNYTFTTHDLSEFPTPLSANNSVMDNTVWGAQDGLIPVIDINNGALDHIVSLDCDAMACANWMPSFSEQLGGLSDLAISDCKMGFYGGFQNFNSRYQPHVGEFGEECCGFVEDIKPPAYPNTARENWGIQGNQMQAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHENHKEDFYGGDSIHFQLKNDEEDWLQEAMASLVYLSHSSPEDM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4050g00003 265 ProSiteProfiles CCT domain profile. 167 209 IPR010402 GO:0005515
Mupr4050g00003 265 Pfam CCT motif 167 209 IPR010402 GO:0005515
Mupr4050g00003 265 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 124 223 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4050g00003 Mupr-Chr4050 27779 29439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4050g00003 163 217 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.85e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr4050g00003 CCT 8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4050g00003 - - vra:106761508 479.174