Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4049g00009 ATGGATGGGAGAGAAGGCATGGCATTTCCTGGTAGCTCTGCTCCTTATTACATGCAGCATAGAGGGATTAGTGTGTCTGGTCCTGTAACTGGAACACAGAGTGGAGGGTTCCAACCACCCTCTGGCTTCAGAGCCTTGTCAAATGTCTCTTCGGGTTCTACATTTTCATTAGAGCCTCATCCTCATCCTCATGCTCAGCCTCAGCCTCAGCCTCAGCCTCATCCTCATCCTCAGGCCCAGGCACAAGCCCAGGCTCAGCCCCAGCCTCAGCCTCAGCGTGGTAGTTTTAGCCATGGCATTAACATAGGTTCATCTCCTGATGGTGGAGGTGGAGGTGGAGTACCTTCTTCTGGTGAGCCTGTGAAAAAGAAAAGAGGGAGGCCTCGTAAGTATGGTCCTGATGGAGCTGTTTCCTTGGGACTCTCTCCCATGTCTGCCACTGCTAATTCCACCCCAGGATCAGCCTCTCCTTCAGAGAAGCGGCCCAGGGGGCGCCCACCTGGAAGTGGAAGGAAGCAACAGCTAGCCTCTCTAGGTGAATGGATGAACAATTCTGCAGGACTGGCCTTTTCACCTCATGTTATCACTATTGGATCTGGGGAGGTGGACATTGTGGCAAAGTTATTGTCATTCTCACAGCAGAGACCTAGGGCTGTTTGCATCTTAACTGGAACTGGGACAGTTTCTTCAGTCACTCTGCGCCAGCCAGCTTCTACTAGTGTTAGCGTTACTTACGAGGGCCGATTTCAAATATTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGAAGGTGGACCTCCTCGCAATAGAACAGGTGGCATGAGTGTTTCCCTCTCTAGTCCTGATGGTCATATTATTGGTGGTGGTGTTGCTAGGCTTATTGCTGCAAGCCCAGTGCAGGTAGTAGTATGCAGTTTTGTATATGGGGGCTCCAAGCCAAAGGCTAAAGAAGGGACCACTACAAAAGATAGCAGTTCAGAGCCTCAGAGTAGTGATAAGTTAGCTTCTCCAGGCAGTGCTCCGCCTAATCAAAACTACACCTCTTCTTCACCTGCCACAGGCATTTGGCCAGGGGACGTGAAAAGTGCACATCCACACACTGGTATTGACTTGACACGTGGCTGA 1125 0.5067 MDGREGMAFPGSSAPYYMQHRGISVSGPVTGTQSGGFQPPSGFRALSNVSSGSTFSLEPHPHPHAQPQPQPQPHPHPQAQAQAQAQPQPQPQRGSFSHGINIGSSPDGGGGGGVPSSGEPVKKKRGRPRKYGPDGAVSLGLSPMSATANSTPGSASPSEKRPRGRPPGSGRKQQLASLGEWMNNSAGLAFSPHVITIGSGEVDIVAKLLSFSQQRPRAVCILTGTGTVSSVTLRQPASTSVSVTYEGRFQILCLSGSYLVAEEGGPPRNRTGGMSVSLSSPDGHIIGGGVARLIAASPVQVVVCSFVYGGSKPKAKEGTTTKDSSSEPQSSDKLASPGSAPPNQNYTSSSPATGIWPGDVKSAHPHTGIDLTRG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 314 374 - -
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 322 355 - -
Mupr4049g00009 374 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 345 IPR039605 GO:0003680
Mupr4049g00009 374 SUPERFAMILY AF0104/ALDC/Ptd012-like 190 308 - -
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 62 76 - -
Mupr4049g00009 374 Pfam Plants and Prokaryotes Conserved (PCC) domain 192 307 IPR005175 -
Mupr4049g00009 374 CDD DUF296 192 306 IPR005175 -
Mupr4049g00009 374 Gene3D - 192 323 - -
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 25 57 - -
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 77 102 - -
Mupr4049g00009 374 PRINTS AT-hook-like domain signature 122 132 IPR017956 GO:0003677
Mupr4049g00009 374 PRINTS AT-hook-like domain signature 158 169 IPR017956 GO:0003677
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 142 157 - -
Mupr4049g00009 374 MobiDBLite consensus disorder prediction 23 174 - -
Mupr4049g00009 374 ProSiteProfiles PPC domain profile profile. 187 329 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4049g00009 Mupr-Chr4049 117395 120974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4049g00009 1 374 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.752 1.28e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4049g00009 - - gmx:100790569 521.931