Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4045g00006 ATGGAATCCACTCTAGTCGCCAATCAGCGGACTCCACGTGTCATACAGGCAACACGTCACATCATCCCTTCATGCGTCCGTGTCCCACCCCGCAAAAAGTCCTTACCTTTTTGCTCACTTTTCTTTCCCCTTCTTAGAGCGAGAAACAGAAACTCCAACAAAGAAAGAGCGTGTGGGTGTGTTTGTGTATGCGCGCATTCACTCAGAGTGATGTGCAACAAGATTAGTCCTTCTTCTTCAGACATTCAAACCACCTCTATTATGAAGAGGACACGAAAACAGCCTAACAAATATATTTCTTCTTCATCGTCGTCCTCTTCCTCTCTTAAACCTCATCGGCGCAGGAACAGGACCAAGACGAGAAAGCCCAAGTTCGTGAGTCTCCGTCTGCAGCTGTCCGAGCCCAAGAAGATGGCTCAGCCCAAGCCCAAGCCCAAGCCCAAGGCCCAACAGCCGCAGCTGAACCTGTTCCCCCTGCATCCGGAGCACCAGGACATGCACGAGGAGCAAAACGTGGCGTTTCTGTTCAGCTCCGACGGCGGCGCAACGCTGACCGGGCTGCTGGAGGACGAGTCAACAACGACGACGTCGCCGTCGGAGGAGGAGGGGTCGCTGTCGGCGCTGACGTATCCGGCGGAGGACAGCGGGAGCTGGCTGGTGAGGAAGGCGATGAGGCGGAGGGAGAGCGAGGAGGGGAGCGAGGAGAGGTGGGTGTGCTACTCGGAGGTGGTGGAGGAGAAGAAGGAGGCGATGGAGGAGGTCACGAGTTATTGCGCGGCCACCGTGGCGGGGAACACCACGAGGTCATTCGGATTGTTGTCCTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCGCTTTACGTCGCGGGTGAGGAGGCCCCACAAACTGTCCCGGACTTCCTCAATGGTCTCCTCTTTCATAATGCTCTCCTTCCCCATGTTGCATGGGACGGTTGGGGGAGTGGTGTTGTTGGGAACGCATGGAATGTTCCTGAGGATTGTGGGGCTAACACGATGAAGGTGAAGGAAGAAACTGGTTGGAAGTTGGGGCAGAGGGAGGCAAGTGTGCAGAGATACAAGGAAAAGAGGCAAAGCAGGCTCTTCTCTAAGAGGATTCGTTATGAAGTTCGCAAGCTGAATGCAGAGAAGCGGCCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1206 0.5481 MESTLVANQRTPRVIQATRHIIPSCVRVPPRKKSLPFCSLFFPLLRARNRNSNKERACGCVCVCAHSLRVMCNKISPSSSDIQTTSIMKRTRKQPNKYISSSSSSSSSLKPHRRRNRTKTRKPKFVSLRLQLSEPKKMAQPKPKPKPKAQQPQLNLFPLHPEHQDMHEEQNVAFLFSSDGGATLTGLLEDESTTTTSPSEEEGSLSALTYPAEDSGSWLVRKAMRRRESEEGSEERWVCYSEVVEEKKEAMEEVTSYCAATVAGNTTRSFGLLSLKLDHQGILNAWSDKGSLYVAGEEAPQTVPDFLNGLLFHNALLPHVAWDGWGSGVVGNAWNVPEDCGANTMKVKEETGWKLGQREASVQRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4045g00006 401 Pfam CCT motif 358 400 IPR010402 GO:0005515
Mupr4045g00006 401 ProSiteProfiles CCT domain profile. 358 400 IPR010402 GO:0005515
Mupr4045g00006 401 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 84 401 - -
Mupr4045g00006 401 MobiDBLite consensus disorder prediction 79 153 - -
Mupr4045g00006 401 MobiDBLite consensus disorder prediction 110 124 - -
Mupr4045g00006 401 MobiDBLite consensus disorder prediction 79 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4045g00006 Mupr-Chr4045 21424 27984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4045g00006 273 400 C2C2-CO-like Transcription Factor Family AT1G73870 45.312 4.83e-23 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr4045g00006 CCT 3.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4045g00006 - - gmx:100811815 439.499