Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr403g00003 ATGGCTCTAGTAAGGACAATTTTCTCGTATAGCAACATCAGCATGCACAAACTTGTAGATTCTTCACGCTTACCTGATTCACTGTTGCTGGCATTTATTTCATCGACTGCATACATCAGCCAAAGAAAGAAGACAAAAGCTGAGAATCCAATTGAATTCCCAGCCTACAATTGTGTGAGGCAAAGTAAAATGGGGTGCCAGGCATTGGAAAAGGCAAAAGCAAAACATAAGAAGGGGTTATGGTCCCCTGAAGAAGACAATAAGCTCAGAAACCACATCCTTAAGCATGGTCATGGCTGCTGGAGTTCTGTCCCCATTAAGGCAGGCTTGCAAAGGAATGGAAAGAGCTGCAGATTAAGGTGGATTAACTATCTAAGGCCAGGATTAAAGAAAGGCAAGTTCACCAAACAGGAAGAGGAGACAATCCTGGCCCTTCACCACATGCTAGGCAACAAGTGGTCGCAGATATCACAGCATTTACCAGGAAGGACAGACAATGAAATTAAAAACTACTGGCATTCATATTTGAAAAAGAGAGTGGCCAAAGCTAAGGAAATGGAATCTCATAACCAAATTAAGCATGCTAGCTCAAGCTCAGATACCATGGACTCTTCACATTCTCTCCAAAAACTTGCAACTCAAGGCCCACAAAATTACAACTTCACCAAAGAGGCTTGTCAAAGCTCCTTACCAAAACTGTTATTTGCTGAGTGGCTCTCATTGGACCATGTACATGGTGGGAACTCTGCAAATTCACTTGACTCTTTGGTCCTGAGGAATGGATTTGATCAAAATTCATGTTTTCAAGAAGCTGCAATTCATGATATGTCAGAGGTACCCTTTGGTGGAGAGTACCATAAATGTCTAACCAACGTTTCAACCCCTGAGATGTTCAATTCACAGCTAAGGTATGCAAATCAAATGGTGGAAAATGGTTTCATCCACTGTATACCCGGGGTTGACTTAAGTAGCAATTTCAGCATGAGCAATGATGCAATAATGGGTGCTTGGACTCCTCAAGAAGACCAAGCCTTGGTTGACTACATCAACAACCATGGCCATGGAAGTTGGCGTACACTCCCCAAACATGCAGGTCTTCTACGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGGCATCAAGCGTGGTCCATTTACTAAAGAAGAAGAAAGTACAATTGTTCAACTTCATGGCATGCTTGGCAACAGGTGGGCTGCTATAGCATCCCAACTACCTGGAAGAACCGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGCCTCCTTCGGTGTCATTTCCTAAGAGCAAAACAGCCATGTGTCATTCCTGATCAAATCATTGTCAAGTCTGAATCTCCTTCGACGCGTCACATGGTACAATGGGAAAGTGTGAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCGTTTCTCAATTCATGGCCAACAAGTAAAACATGCCCTGATCACTTTCTTCAACTTTGGCATTCTGAGGTTGGACACTCATTTCGCATGATCAAGGGAAAGGAAGCAATACTGTGTCGAAGTCCTTTCTCACAACCTTCATCCTCATCAAAATTGGAGTCTTGTTCGGATGTGTCATTGCAGGTGAAAAACACTGGAACTAGTAGTTGCACTCCAAATCATGAGGATGTTAACATGATTCATGAACAAACAAGTAGCTACAAACCAAAGCTTGATGATGACACAGCTGGGTCAGAGTCAGGCAATTATGAATTTCTTGATGCTTCTGATTCTGCACTAAAGCACCTACTACATATGCCTGATAGTGATATAGGATTCTTGGGACAGAATGACAATTTCCTAAATCTCCTTGAT 1866 0.4271 MALVRTIFSYSNISMHKLVDSSRLPDSLLLAFISSTAYISQRKKTKAENPIEFPAYNCVRQSKMGCQALEKAKAKHKKGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKKGKFTKQEEETILALHHMLGNKWSQISQHLPGRTDNEIKNYWHSYLKKRVAKAKEMESHNQIKHASSSSDTMDSSHSLQKLATQGPQNYNFTKEACQSSLPKLLFAEWLSLDHVHGGNSANSLDSLVLRNGFDQNSCFQEAAIHDMSEVPFGGEYHKCLTNVSTPEMFNSQLRYANQMVENGFIHCIPGVDLSSNFSMSNDAIMGAWTPQEDQALVDYINNHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGPFTKEEESTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRCHFLRAKQPCVIPDQIIVKSESPSTRHMVQWESVRVEAEARLSMESSFLNSWPTSKTCPDHFLQLWHSEVGHSFRMIKGKEAILCRSPFSQPSSSSKLESCSDVSLQVKNTGTSSCTPNHEDVNMIHEQTSSYKPKLDDDTAGSESGNYEFLDASDSALKHLLHMPDSDIGFLGQNDNFLNLLD 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr403g00003 622 SMART sant 386 434 IPR001005 -
Mupr403g00003 622 SMART sant 77 127 IPR001005 -
Mupr403g00003 622 SMART sant 333 383 IPR001005 -
Mupr403g00003 622 SMART sant 130 178 IPR001005 -
Mupr403g00003 622 FunFam MYB transcription factor 389 436 - -
Mupr403g00003 622 Gene3D - 334 386 - -
Mupr403g00003 622 Gene3D - 78 130 - -
Mupr403g00003 622 Pfam Myb-like DNA-binding domain 131 176 IPR001005 -
Mupr403g00003 622 Pfam Myb-like DNA-binding domain 387 432 IPR001005 -
Mupr403g00003 622 Pfam Myb-like DNA-binding domain 78 125 IPR001005 -
Mupr403g00003 622 Pfam Myb-like DNA-binding domain 335 381 IPR001005 -
Mupr403g00003 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 335 381 IPR017930 -
Mupr403g00003 622 SUPERFAMILY Homeodomain-like 76 172 IPR009057 -
Mupr403g00003 622 Gene3D - 132 206 - -
Mupr403g00003 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 125 IPR017930 -
Mupr403g00003 622 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Mupr403g00003 622 CDD SANT 81 125 IPR001005 -
Mupr403g00003 622 CDD SANT 389 432 IPR001005 -
Mupr403g00003 622 CDD SANT 336 381 IPR001005 -
Mupr403g00003 622 ProSiteProfiles Myb-like domain profile. 126 176 IPR001005 -
Mupr403g00003 622 Gene3D - 389 436 - -
Mupr403g00003 622 ProSiteProfiles Myb-like domain profile. 382 432 IPR001005 -
Mupr403g00003 622 FunFam MYB-related transcription factor 334 386 - -
Mupr403g00003 622 SUPERFAMILY Homeodomain-like 333 428 IPR009057 -
Mupr403g00003 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 180 IPR017930 -
Mupr403g00003 622 ProSiteProfiles Myb-like domain profile. 329 381 IPR001005 -
Mupr403g00003 622 PANTHER MYB DOMAIN PROTEIN 55 66 228 - -
Mupr403g00003 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 382 436 IPR017930 -
Mupr403g00003 622 FunFam MYB transcription factor 133 204 - -
Mupr403g00003 622 CDD SANT 133 176 IPR001005 -
Mupr403g00003 622 FunFam MYB transcription factor 75 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr403g00003 Mupr-Chr403 14415 27995 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr403g00003 335 614 MYB Transcription Factor Family AT3G61250 51.034 1.62e-79 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr403g00003 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr403g00003 K09422 - gmx:100782075 509.605