Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4037g00002 ATGGCGGCGGAAGGTGCTGATAATTCTCAGAGCAGGGAGCATGAAAGAGTGGTTTCGAGAAAGCTTCAAGTAGATGAAAAAGTCGAGGTGAGGAGTTTAGAGGTGGCGTTTCTGGGATCGTGGCACCTTGGGACAGTTATCCAATGCGAGAAGCTGAAGCGTCACGTGAGATATAAGAATATTTTGGATGATGATGGGGTGAATTATCTTGTGGAGGAACTGAGTGTTTCAAAAGCTTTGGATGGTGAGATTGCACATGCAAACTGCTATGAGCGTGGGTTGATTAGGCCGGTGCCTCCTTTGGTTGATTTTAACAAAGGGGACCTCAGATTTGGTCTGTGTGTTGATGTGAACAATCAGGAAGCTTGGTGGGAAGGTGTTATATTTGACCACTGTGATGGAATGGAGAAGAGAACTGTGTTTTTCCCTGATTTGGATGATGAAATGCAAGTTGGAATTCATCAAATGCGGCTTACTCAGGACTGGAACCAAGTTACCGATGAGTGGAAGCAGCGAGGGATCTGGGTGTTTCTTGAATTGGTTGAGAAGTGGGAGAGGGAATTGTTTGTTGTAGTTTCGGCTAAGCAAATTTGGTATGATGTTCGCGTAAAAAAGGAATTTGAGATGATTAAAGAGTGGACATGTAATATGAAACACTTGTGGGTAGATATGGTAAAGGAGGTAGTTAATCACTACTTATCTCTTACGGTAAAAGAAGTTCTCTCAACCTTAAACCTTCCGGGGAATTTATTAAATGATGAATCACCTGCTGAAGCTTCGGCTAGTCTTGACCGAAGCATGACCTTGCCTGATAATGAAATTGTTGGGCAGAAAGGACCTGTTCCTCCAGTTAAAGAGATCTTACCTAAGTTTCAAAAAGAAATTAACTACTATGGTGCTTGTGAAGTAGTTTCAGGTGCTAGCGGTTCTGAAGAAGGTGGAGAACATAGATCCCCAACTCCTTTAAGGTCCAACAACTATTGGAAACCTCTGAAGTTGTCTGAAGTTGAATTCTGCCCTGATGCTGTTAAGGAATATCCACTTGCTTCCAAACGTGCAGATAAGGCACTTTGGATGGAAAAATTACAAAAACATCTTGTATATCTTGGATGGAAAATTGAGTGGTCAAATAGATTGGGTATTAAACGTTACAGGTATTGGGTGCCTGATAAACTGGGCCAAAAGGTTTACCCTTCACTCCTTAAAGTTTGTAAAGCTATGAACAAGGACCCCAACATGAACTCCTTGCAGTTCCAAAATGATCAGAGTATAATGCATCCTACAGTTGATTGTCATCTTTCAGATGTGCCTCTTAATCCATCAGAAAATATTCAGGATCCAGATATCTTTCCTCCAACTGGGCCATCTACTCCAATTGAAGATGAAGTTGAAGATGTACCTGAGTTTTGTCCTCAAGCTGTTGTGCAGTATTATCACTCGCATTTATCCAAAATGAATCGGGTTACTAAAAGAAAATGGATAATAAAAGCAAAGAGGCATCTGTTAGCAGAAGGATGGATTTTTGACTATCCACCTCTAACTAATAAGAGAAGGGGAATCATATACATGTCTCCACAAAATCAGAAATTCCCAACACTCCATGCAGCATGCAAATTTTGTATCAAGGCAAGTATTCCTGAATCGGCTACGTCTGAGATGCAATCAAGCATGAATGAAGAAAATGTTAATCAGGTTTGGAGTGGTGAATTGGTATGTAAACAATCCCAGCAGGCTATGGATGGTGGTGCTGCTAATACATCAACAGCAAATCGAAAGCGGAAAAGTTCGACGGATTCAGAAGACAACATGCCTAAGTGCCAAAGCAATGGATTGCCTCTAGGGGTGCCAAGATCAAAGAGGGTGCAAAAAGTGTCTGCCCCTTCTCCGTTACATCATAAACCTCTAAATGTTCTGTCTTGGTTGATAGACAGCAACATTATCTTACCAAGGTCTAAGGTTTATTATAAGGCGAAAGGCAGGTACCGTACAGCCCATACGTTGGCTGATGGAAAAATAACTCGTGATGGAATCAAGTGTAACTGTTGCCGGGCAATATACAATTTGGTTGACTTTGAAAAGCATGCTACTCTCAGTGATACCAGCACACCCTCTGCCAGTATCTTTCTGGAAGATGGTAGATCACTCTTAGATTGCCAGATACAAATGATGCAAGATTATAAGACAAGGGAAACTAGTAGAAAATCATTCGGTGATTTGTTTCTAGCCGAGAATGACTACATTTGTTCTCTTTGCAAATACGGTGGTGAACTTATTTTATGTGATAAATGTCCGTCTTCATTTCATAAGACGTGTCTTGGTTTGGAGGATATCCCTGATGGTGACTGGTTTTGTCCATCATGTTGTTGCGGGATTTGTGGCCAAAGGAAAACTGATGGAGATGATGAGGTTGGACATTTCCTTACATGCCTTCAGTGTGAACATAAATATCATGTTAGGTGCCTGGAAAATGGAGCTGTAGATATATCAAGATATCTTGGAAGCGGGTTCTGTGGAAAAGACTGTGAAAAGAATGAAACTCATTTGGCCAATCCATCAGCAGATTGCTCTAGGAATGGTTACGGGGTTGGCTTATTTGCATTATGA 2604 0.4128 MAAEGADNSQSREHERVVSRKLQVDEKVEVRSLEVAFLGSWHLGTVIQCEKLKRHVRYKNILDDDGVNYLVEELSVSKALDGEIAHANCYERGLIRPVPPLVDFNKGDLRFGLCVDVNNQEAWWEGVIFDHCDGMEKRTVFFPDLDDEMQVGIHQMRLTQDWNQVTDEWKQRGIWVFLELVEKWERELFVVVSAKQIWYDVRVKKEFEMIKEWTCNMKHLWVDMVKEVVNHYLSLTVKEVLSTLNLPGNLLNDESPAEASASLDRSMTLPDNEIVGQKGPVPPVKEILPKFQKEINYYGACEVVSGASGSEEGGEHRSPTPLRSNNYWKPLKLSEVEFCPDAVKEYPLASKRADKALWMEKLQKHLVYLGWKIEWSNRLGIKRYRYWVPDKLGQKVYPSLLKVCKAMNKDPNMNSLQFQNDQSIMHPTVDCHLSDVPLNPSENIQDPDIFPPTGPSTPIEDEVEDVPEFCPQAVVQYYHSHLSKMNRVTKRKWIIKAKRHLLAEGWIFDYPPLTNKRRGIIYMSPQNQKFPTLHAACKFCIKASIPESATSEMQSSMNEENVNQVWSGELVCKQSQQAMDGGAANTSTANRKRKSSTDSEDNMPKCQSNGLPLGVPRSKRVQKVSAPSPLHHKPLNVLSWLIDSNIILPRSKVYYKAKGRYRTAHTLADGKITRDGIKCNCCRAIYNLVDFEKHATLSDTSTPSASIFLEDGRSLLDCQIQMMQDYKTRETSRKSFGDLFLAENDYICSLCKYGGELILCDKCPSSFHKTCLGLEDIPDGDWFCPSCCCGICGQRKTDGDDEVGHFLTCLQCEHKYHVRCLENGAVDISRYLGSGFCGKDCEKNETHLANPSADCSRNGYGVGLFAL 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4037g00002 867 Pfam Agenet domain 26 100 IPR008395 -
Mupr4037g00002 867 MobiDBLite consensus disorder prediction 577 622 - -
Mupr4037g00002 867 SMART agenet_At_2 107 164 IPR014002 -
Mupr4037g00002 867 SMART agenet_At_2 20 88 IPR014002 -
Mupr4037g00002 867 ProSiteProfiles Zinc finger PHD-type profile. 745 790 IPR019787 -
Mupr4037g00002 867 SMART PHD_3 747 788 IPR001965 -
Mupr4037g00002 867 SMART PHD_3 789 842 IPR001965 -
Mupr4037g00002 867 Pfam PHD-finger 747 787 IPR019787 -
Mupr4037g00002 867 Pfam Tify domain binding domain 670 722 IPR032308 -
Mupr4037g00002 867 MobiDBLite consensus disorder prediction 577 592 - -
Mupr4037g00002 867 PANTHER PHD FINGER PROTEIN 12 466 849 IPR042163 GO:0003714|GO:0045892
Mupr4037g00002 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 741 800 IPR013083 -
Mupr4037g00002 867 SUPERFAMILY FYVE/PHD zinc finger 725 787 IPR011011 -
Mupr4037g00002 867 CDD Tudor_Agenet_AtDUF_rpt1_3 22 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4037g00002 Mupr-Chr4037 1355 4771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4037g00002 31 843 PHD Transcription Factor Family AT5G58610 33.571 1.26e-132 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr4037g00002 Agenet 1.1e-13 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4037g00002 - - gmx:100814680 1203.73