Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4035g00011 ATGTCTTCTGATTCTGCGCAATCTAATGAGCGTTCGCAATGGAAACTAGAAGAAGTTCTTTCAGTTATTATAGTGTGCTTGATCTTTCTTACACTGAGTGATTGCTTCGGCATATTTAAGCGTTTCTTGTGCGGAATTTGGCGCGGTAGAAGCCAGGTCGAAAGGCAACTTGTAAATGATTCCATTCCCGAAGACCCTTCTCTGCAGCTTCAAAGCCGTGGATTGGACCTCCTCACGGTGCAGTCTCTTCCCACGTTTCGCTTCGAGAAAAACGAGGGAGAACAAGACAAGGCAACTAACATGGAGTGTGCCATTTGCCTCGGAGAGTTTGAGGAAGGGGAGTGCCTGAAACAGATTCCACACTGCAGCCACAGCTTCCATAGTCTGAAGAAACCACAATTTGGGTTTCGTGTCTCGTTATCTTTGAGCCTACACAACGAAGCTTCTATTGTCAGTCATACCGCGTAG 468 0.4658 MSSDSAQSNERSQWKLEEVLSVIIVCLIFLTLSDCFGIFKRFLCGIWRGRSQVERQLVNDSIPEDPSLQLQSRGLDLLTVQSLPTFRFEKNEGEQDKATNMECAICLGEFEEGECLKQIPHCSHSFHSLKKPQFGFRVSLSLSLHNEASIVSHTA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4035g00011 155 SUPERFAMILY RING/U-box 79 128 - -
Mupr4035g00011 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 130 IPR013083 -
Mupr4035g00011 155 PANTHER RING-H2 FINGER PROTEIN ATL16 28 127 IPR044600 GO:0016567|GO:0016740
Mupr4035g00011 155 Pfam RING-like zinc finger 102 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4035g00011 Mupr-Chr4035 44742 45441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4035g00011 73 127 C3H Transcription Factor Family AT2G27940 52.727 3.79e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4035g00011 - - gmx:121172630 189.889