Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4033g00006 ATGAGTTGGAGTAGTAATAGTAGTTCAGCGCTGCATGGAACAAGCAGAGGCAGGGACAAGAAATTGAAGGGTGTCCGACGTCGTAAATGGGGCAAGTGGGTGTCGGAGATTCGTGTTCCGGGCACTCAAGAGCGCTTATGGTTGGGAACCTACGCCACCGCCGAGGCTGCCGCCGTGGCCCACGACGTTGCTGTCTACTGTCTGAGGAGACCTTCTTCCTTTGACAAACTTAACTTCCCCGATACCTTGTCTTCCTACGCTCTTGAGCTCAGGGACATGTCTCCTAGGTCTGTTCAGAAGGTCGCTTCCGATGTCGGCATGGACGTTGATGCCAGAAACATCATTGCTTCCAAAACATCAACGCCCCAACCTGTAACTTACGATACTCAGAAGAATATTGACGGTCATGATCGCCTTTGTGTGTCTACTGTTCATTCTGATCTCCTTTGTTGGGATGGTTTGGGGAATGATGATTGCTCCACTTGGCAAGCAAGTGCTGCAGATTCTACACAAATGGACCAGCCCTTGAGCATTTCCATTGAAGATTATCTTTAG 555 0.4973 MSWSSNSSSALHGTSRGRDKKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATAEAAAVAHDVAVYCLRRPSSFDKLNFPDTLSSYALELRDMSPRSVQKVASDVGMDVDARNIIASKTSTPQPVTYDTQKNIDGHDRLCVSTVHSDLLCWDGLGNDDCSTWQASAADSTQMDQPLSISIEDYL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4033g00006 184 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Mupr4033g00006 184 SUPERFAMILY DNA-binding domain 21 81 IPR016177 GO:0003677
Mupr4033g00006 184 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 MobiDBLite consensus disorder prediction 1 23 - -
Mupr4033g00006 184 CDD AP2 20 82 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Mupr4033g00006 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4033g00006 Mupr-Chr4033 48759 49313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4033g00006 21 143 AP2-EREBP Transcription Factor Family AT1G71520 52.000 2.87e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4033g00006 AP2 9.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4033g00006 - - gmx:100803550 218.009