Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4033g00001 ATGGACATGCCTTCAACGACCCATGTTGGTGCTGCTTCTTCAGCATACAGAGGGGTCCGCAAGAGGAAATGGGGAAAGTGGGTTTCCGAAATCCGCGAACCAGGAACCAAGACCAGAATCTGGCTCGGCAGTTTCGAGACGCCGGAGATGGCAGCAGCAGCATATGACGTGGCGGCGTTGCATTTCAGGGGACGCGACGCCAGGCTCAACTTCCCCGAACTTGCTAGCACGCTCCCTCGCCCCGTCAGCAACAATTCTGACCACATTCGCATGGCGGCGCACGAGGCCGCTTTGAGGCTTCGGACCAACAACGTGGCGCCTGACACCGGTGGCTCCGCTGCTTCGGGCTCTGCTGCTCCCCTCACCGTCAGGCTCTCCCCCACCCAGATTCAGGCCATCAATGACTCGCCCATGGACTCCCCTCAGACTTGGATGCAAATGCCCGACGCCTTCATGCTCGATCATCACTCCATGCTCTTCGCCAATGGCTACGCGTTCGAGGACGACGACTGGGACAATATGCAGAGAACGAAAGAGCTGATGTATTGGAAGTCCACTTGTCAATCAGATGAAGAAGTTCAAGTGTGTTTTCTTTTTGTCTCATTATGA 609 0.5616 MDMPSTTHVGAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELASTLPRPVSNNSDHIRMAAHEAALRLRTNNVAPDTGGSAASGSAAPLTVRLSPTQIQAINDSPMDSPQTWMQMPDAFMLDHHSMLFANGYAFEDDDWDNMQRTKELMYWKSTCQSDEEVQVCFLFVSL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4033g00001 202 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Mupr4033g00001 202 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 FunFam Ethylene-responsive transcription factor 2 14 73 - -
Mupr4033g00001 202 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 155 - -
Mupr4033g00001 202 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Mupr4033g00001 202 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4033g00001 Mupr-Chr4033 1802 3070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4033g00001 14 175 AP2-EREBP Transcription Factor Family AT1G71450 61.350 2.04e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4033g00001 AP2 4.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4033g00001 - - aprc:113869810 315.079