Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4029g00001 ATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTCCCAAAGGGACTTAGGGTTCTTCTGCTTGAAGGAGATAGTAGTTCAGCTGCTGAGATAAGAGAACAGCTTGAGGCCATGGACTATAATGTTTCTATTTTCTATGATGAGAATGAAGCCTTGTCAGCAATCTTGAGTAGTCCTGAAGGCTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGTAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACTATTATGATACTTACAATTCTTCATGTAGTGACTTCAAAGAACCAGTGTCTGAACACCATGATGAAGTGCATTGCGCTTGGTGCAGTTGAGTTCCTCAGTAAACCACTCTCCGAGGACAAGCTAAAAAATATTTGGCAGCATGTTGTTCACAAGGCATTTAATGCAGGGGCAAATGTCCTGTCTGAATCACTAAAGCCTGTAAAAGAATCTGTAGAATCAATGCTGCAGCTCCAAACAGACAATGAACAAGATAAAAGTATGGATTCAATTGACTTAGAGAATGTGTTCAGGTTTAGTGATAATGACCACGATCAGTATGCTGTATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACAGGGGACAAGGTTACTTGATGATGGAGATTGCCATGACCAGACTAATTGCTCAACAGAAAAGGAAAGTGGGGAACATGATGGGGAATGTAAATCTGTCGAAACTTCATCTGAGAATTTGAATGCTGAAAGTTCTCCTCAACCAATGGAACCTGAGGAGACTCTGATTAAGGAGGAGGAGAATTTTGCCAATGGTTCCAAGGGTGAGACCGCTGTTTCACTCAATCCACATAATAAAAAGTTTCTCAGCAATGCCGATGGCAATACATCTCCAAATAAAACGGGTGTACTTAATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCATAAAAAATTTGTAAAGGCTGTCGAACAACTAGGCATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGACGGCTTGACGAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCAGGGGAAGACGATAAAAAATGGCATAATCACAGAGATACAACGCAAAGGAGCTACTATATGCAAAGACCAATCATGGCATACCCTCCATATCATTCTAATCACACCCTTTCTCCAGCTCCTATGTATCCTATGTGGGGACAACCTGGCAGTCAAACAGCTGGCATACAGATTTGGGGCCCTCCTGGTTATCCCTTGTGGCATCCTACAGAAAGTTGGCACTGGAAACCTTATCTGGGGGTGCATATGGATGCATGGGGATGCCCATTGTTGCCTCCTCCTCAAGCTCCTTGTTTTCCCTACAATCAAAATATACCTGGATTGCACAATCCTAAAGTAGTGGATTATAGATTCAGCATGCCACGAAGTTCTGTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTAGTGAAGGAAGCAATTAGCAAGCCATGGCTACCATTGCCCTTAGGACTCAAACCTCCTTCCATGGATAGTGTGTTGGCTGAGCTCTCCAAACAAGGCATATCCAGCATCCCTCTTGGCAACAAGGGTTCTACTACTCCTAAACACAGCTGA 1701 0.4309 MVCTANDLQGWKDFPKGLRVLLLEGDSSSAAEIREQLEAMDYNVSIFYDENEALSAILSSPEGFHVAIVEVSTSSSLGGFKFLENAKDLPTIMILTILHVVTSKNQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFNAGANVLSESLKPVKESVESMLQLQTDNEQDKSMDSIDLENVFRFSDNDHDQYAVCDKYPAPSTPQLKQGTRLLDDGDCHDQTNCSTEKESGEHDGECKSVETSSENLNAESSPQPMEPEETLIKEEENFANGSKGETAVSLNPHNKKFLSNADGNTSPNKTGVLNDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVDGLTRHNVASHLQKYRIHKRQSAPGEDDKKWHNHRDTTQRSYYMQRPIMAYPPYHSNHTLSPAPMYPMWGQPGSQTAGIQIWGPPGYPLWHPTESWHWKPYLGVHMDAWGCPLLPPPQAPCFPYNQNIPGLHNPKVVDYRFSMPRSSVEHHPAEEVVDKVVKEAISKPWLPLPLGLKPPSMDSVLAELSKQGISSIPLGNKGSTTPKHS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4029g00001 566 FunFam Two-component response regulator 317 379 - -
Mupr4029g00001 566 SUPERFAMILY Homeodomain-like 320 377 IPR009057 -
Mupr4029g00001 566 MobiDBLite consensus disorder prediction 246 260 - -
Mupr4029g00001 566 Gene3D - 15 148 - -
Mupr4029g00001 566 MobiDBLite consensus disorder prediction 278 307 - -
Mupr4029g00001 566 MobiDBLite consensus disorder prediction 227 264 - -
Mupr4029g00001 566 FunFam Two-component response regulator-like APRR2 17 151 - -
Mupr4029g00001 566 Gene3D - 317 378 - -
Mupr4029g00001 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 318 377 IPR017930 -
Mupr4029g00001 566 ProSiteProfiles Response regulatory domain profile. 19 140 IPR001789 GO:0000160
Mupr4029g00001 566 Pfam Response regulator receiver domain 20 134 IPR001789 GO:0000160
Mupr4029g00001 566 MobiDBLite consensus disorder prediction 227 245 - -
Mupr4029g00001 566 Pfam Myb-like DNA-binding domain 324 373 IPR001005 -
Mupr4029g00001 566 NCBIfam myb-like DNA-binding domain, SHAQKYF class 321 376 IPR006447 GO:0003677
Mupr4029g00001 566 SUPERFAMILY CheY-like 16 142 IPR011006 -
Mupr4029g00001 566 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 554 IPR044825 GO:0003700|GO:0045893
Mupr4029g00001 566 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4029g00001 Mupr-Chr4029 2309 8977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4029g00001 1 554 Response Regulator Gene Family AT4G18020 49.740 1.08e-141 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr4029g00001 Response_reg 3.3e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4029g00001 - - gmx:100784905 1007.67