Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr4025g00002 | ATGATGAATCCTCAAAATAGTCCATCGGAAGAATTATGTTTTGAGTGCAAGAGCTGTGAGCCCAAGTTCGCATTGGATGGACACAACACTAACCACAAGAAGCCAAAACTTGAGGATGGGAATGGGAATGGAAAACAACATACAAAAATACACGAGTGTTCAATTTGTGGTGAGACATTCTCTCGGGGACAGGCATTGGGAGGCCACATGAGAAAACACAAAGATCGACTCTTAAAGAGATCCAATAATAGTAGTCAAAAGATTATGTTCCACGACCTCAACTTGACTCCTTTGCAGAATGACTTGAAAAGTCGCAGTTGCGAATTGAATAGGAATGACTTTAGAATTTCTACATCAGATCAGAAAATCACAAGCATATATAACAATGAAGTTTGA | 396 | 0.3914 | MMNPQNSPSEELCFECKSCEPKFALDGHNTNHKKPKLEDGNGNGKQHTKIHECSICGETFSRGQALGGHMRKHKDRLLKRSNNSSQKIMFHDLNLTPLQNDLKSRSCELNRNDFRISTSDQKITSIYNNEV | 131 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr4025g00002 | 131 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 53 | 73 | IPR013087 | - | |
Mupr4025g00002 | 131 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 9 | 101 | - | - | |
Mupr4025g00002 | 131 | MobiDBLite | consensus disorder prediction | 24 | 48 | - | - | |
Mupr4025g00002 | 131 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 51 | 73 | IPR013087 | - | |
Mupr4025g00002 | 131 | Gene3D | Classic Zinc Finger | 32 | 107 | - | - | |
Mupr4025g00002 | 131 | SUPERFAMILY | beta-beta-alpha zinc fingers | 48 | 75 | IPR036236 | - | |
Mupr4025g00002 | 131 | SMART | c2h2final6 | 51 | 73 | IPR013087 | - | |
Mupr4025g00002 | 131 | FunFam | Zinc finger protein | 48 | 74 | - | - | |
Mupr4025g00002 | 131 | Pfam | C2H2-type zinc finger | 51 | 75 | - | - | |
Mupr4025g00002 | 131 | MobiDBLite | consensus disorder prediction | 26 | 46 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr4025g00002 | Mupr-Chr4025 | 5138 | 5740 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr4025g00002 | 14 | 103 | C2H2 Transcription Factor Family | AT2G37430 | 42.241 | 1.84e-20 | 80.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mupr4025g00002 | zf-C2H2_6 | 1.3e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr4025g00002 | - | - | cann:107873826 | 106.686 |