Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4025g00002 ATGATGAATCCTCAAAATAGTCCATCGGAAGAATTATGTTTTGAGTGCAAGAGCTGTGAGCCCAAGTTCGCATTGGATGGACACAACACTAACCACAAGAAGCCAAAACTTGAGGATGGGAATGGGAATGGAAAACAACATACAAAAATACACGAGTGTTCAATTTGTGGTGAGACATTCTCTCGGGGACAGGCATTGGGAGGCCACATGAGAAAACACAAAGATCGACTCTTAAAGAGATCCAATAATAGTAGTCAAAAGATTATGTTCCACGACCTCAACTTGACTCCTTTGCAGAATGACTTGAAAAGTCGCAGTTGCGAATTGAATAGGAATGACTTTAGAATTTCTACATCAGATCAGAAAATCACAAGCATATATAACAATGAAGTTTGA 396 0.3914 MMNPQNSPSEELCFECKSCEPKFALDGHNTNHKKPKLEDGNGNGKQHTKIHECSICGETFSRGQALGGHMRKHKDRLLKRSNNSSQKIMFHDLNLTPLQNDLKSRSCELNRNDFRISTSDQKITSIYNNEV 131
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr4025g00002 131 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mupr4025g00002 131 PANTHER ZINC FINGER PROTEIN ZAT5 9 101 - -
Mupr4025g00002 131 MobiDBLite consensus disorder prediction 24 48 - -
Mupr4025g00002 131 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 73 IPR013087 -
Mupr4025g00002 131 Gene3D Classic Zinc Finger 32 107 - -
Mupr4025g00002 131 SUPERFAMILY beta-beta-alpha zinc fingers 48 75 IPR036236 -
Mupr4025g00002 131 SMART c2h2final6 51 73 IPR013087 -
Mupr4025g00002 131 FunFam Zinc finger protein 48 74 - -
Mupr4025g00002 131 Pfam C2H2-type zinc finger 51 75 - -
Mupr4025g00002 131 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr4025g00002 Mupr-Chr4025 5138 5740 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4025g00002 14 103 C2H2 Transcription Factor Family AT2G37430 42.241 1.84e-20 80.5
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4025g00002 zf-C2H2_6 1.3e-11 CL0361
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4025g00002 - - cann:107873826 106.686