Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4025g00001 ATGAAGAGACTGAGAGAAGTCAAAGAAGTGACACGAAACATGATGAATCCCCAAAATAGTCCATCGGAAGAATTATGTTTTGAGTGCAAGAGCTATGAGCCGAAGTTCGCATTGGATGGACACAACACTAACCACAAGAAGGCAAAACTTGAGGATGAGAATGAGAATGGGAAACAACATGCAAAAATACACGAGTGTTCAATTTGTGGTGAGACATTCTCTCGGGGACAGGCATTGGGAGGTCACATGAGAAAACACAAAGATCGACTCTTAAAGAGATCCAATAATAATAGTCAAAATATTATGTTCTACGACCTCAACTTGACTCCTTTGCAGAATGACTTGAATCAATGTTAA 357 0.395 MKRLREVKEVTRNMMNPQNSPSEELCFECKSYEPKFALDGHNTNHKKAKLEDENENGKQHAKIHECSICGETFSRGQALGGHMRKHKDRLLKRSNNNSQNIMFYDLNLTPLQNDLNQC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4025g00001 118 PANTHER ZINC FINGER PROTEIN ZAT5 19 112 - -
Mupr4025g00001 118 MobiDBLite consensus disorder prediction 1 22 - -
Mupr4025g00001 118 FunFam Zinc finger protein 61 87 - -
Mupr4025g00001 118 SUPERFAMILY beta-beta-alpha zinc fingers 61 88 IPR036236 -
Mupr4025g00001 118 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Mupr4025g00001 118 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mupr4025g00001 118 Gene3D Classic Zinc Finger 40 108 - -
Mupr4025g00001 118 Pfam C2H2-type zinc finger 64 88 - -
Mupr4025g00001 118 SMART c2h2final6 64 86 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4025g00001 Mupr-Chr4025 110 603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4025g00001 27 115 C2H2 Transcription Factor Family AT2G37430 40.870 4.83e-19 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4025g00001 zf-C2H2_6 1.1e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4025g00001 - - pcin:129302030 96.6709