Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4020g00001 ATGGAACATAAGAGGAAGCTTAAGGAGGAATATGGAATTGAGCCCTGGACTTTTATTCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATTAAGGTTGCATTGGATTTTGTTTCTCCTGAAAATGTTGGGGAATGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATAAATCATGGGTCTACTGAGGACAAATTGGAGGTGTGCCAAACTACTTTTATTGATTTGATTCTGCCATTTATTTTCTTCTTCATTGTTTTGAGATGTATCATCTTTTTTGTTAGTCTTTGTCTTTGA 336 0.378 MEHKRKLKEEYGIEPWTFIQKVGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHGSTEDKLEVCQTTFIDLILPFIFFFIVLRCIIFFVSLCL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4020g00001 111 ProSiteProfiles JmjC domain profile. 1 66 IPR003347 -
Mupr4020g00001 111 Pfam JmjC domain, hydroxylase 4 49 IPR003347 -
Mupr4020g00001 111 SUPERFAMILY Clavaminate synthase-like 3 79 - -
Mupr4020g00001 111 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 83 IPR045109 GO:0032454|GO:0033169
Mupr4020g00001 111 Gene3D Cupin 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4020g00001 Mupr-Chr4020 400 1330 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr4020g00001 JmjC 2.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4020g00001 K15601 - gmx:100797799 165.622