Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4018g00001 ATGGATTTTGACGTTGAATCCAGATATCCCCACAACGCCAAGGTCATGGTGGGCACTGCCATTCTTCTCTTCATTCTCATAATCATCATTATTTTCTTCCACACCTACGTCCGCTTCTGCCGCCGTCGCCGCCGCCTCTTATCTCATTCGCTTCCCACCGCCGCCCCTTCCAAGGAGCCATGTCTTGACCCTTCCGTCATCAAGTCCCTTCCCACCTTCGCCTTCTCCGCCGCCGCCCACCGCTCCCTCGAGGACTGCGCCGTGTGCTTGTCGGAGTTCGCCGACGGCGAGCAGGGCCGCTCGCTCCCGAACTGTAACCACGCTTTCCACGCTCATTGCATCGATACGTGGTTCGGTTCTCACTCCACGTGTCCTCTCTGCCGAACCCCGGTCCAACCGGGCACGCTTAACGGTGACACCAAACCGGGTTCGGTTACGGTTACGGTTACGGTTCCCGAACCGGGTGAGGGTTGTTCCTCGTCGTCGTTGCCTGGACCGGTTTGGTGTCCGAGAAAGCCGTTGGGTATAATCGTGGAGGTGCCAGAGGTGGAAAGAGGGTCGGATCCTGTAACCGGAGAACAAGGGTTCAGATGGTCGTTGAAGAGGTCAAATAAGACGCTAATGTTGAGTTATAAGTCAGAGGTTGGTTTCAAAACTCTATATTGCTCAGTATAA 675 0.5556 MDFDVESRYPHNAKVMVGTAILLFILIIIIIFFHTYVRFCRRRRRLLSHSLPTAAPSKEPCLDPSVIKSLPTFAFSAAAHRSLEDCAVCLSEFADGEQGRSLPNCNHAFHAHCIDTWFGSHSTCPLCRTPVQPGTLNGDTKPGSVTVTVTVPEPGEGCSSSSLPGPVWCPRKPLGIIVEVPEVERGSDPVTGEQGFRWSLKRSNKTLMLSYKSEVGFKTLYCSV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4018g00001 224 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Mupr4018g00001 224 SMART ring_2 86 127 IPR001841 -
Mupr4018g00001 224 Pfam Ring finger domain 85 128 IPR001841 -
Mupr4018g00001 224 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 138 - -
Mupr4018g00001 224 CDD RING-H2_EL5-like 85 128 - -
Mupr4018g00001 224 SUPERFAMILY RING/U-box 66 134 - -
Mupr4018g00001 224 FunFam E3 ubiquitin-protein ligase ATL6 52 134 - -
Mupr4018g00001 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 134 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4018g00001 Mupr-Chr4018 15587 17784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4018g00001 2 132 Rapid Response to Elicitors AT3G16720 42.282 4.96e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4018g00001 - - gmx:100800433 285.804