Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4017g00004 ATGTCTAGCCAGAGAAGCTCCAGAACATCATCGAAATTCACCGTGAGTGAGATTCATGATCTGATGTTGAGGTTACAAGCACTGCTACCACAACTAAACCAAACAAGCAACTCAAGGGTATGCATGCCAACACATGAATCAGTGAGCATAAGGAAGATCATGAAGGAAACTTGCTCTCACATCAATAGGTTACAGAAAGAGGTGAAAGACCTTGGTGAAAGGCTAGCAGAGTTGGTAGATTCTGTAGACATTAGTGATATTGAGGAGGAGCGTTTTGCAGGACTTTTGCAACACTAA 297 0.4242 MSSQRSSRTSSKFTVSEIHDLMLRLQALLPQLNQTSNSRVCMPTHESVSIRKIMKETCSHINRLQKEVKDLGERLAELVDSVDISDIEEERFAGLLQH 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4017g00004 98 Gene3D - 12 91 IPR036638 GO:0046983
Mupr4017g00004 98 Coils Coil 54 81 - -
Mupr4017g00004 98 PANTHER DNA BINDING PROTEIN 1 97 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4017g00004 Mupr-Chr4017 9756 10509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4017g00004 3 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 42.353 3.93e-12 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4017g00004 - - gmx:100790746 127.487