Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4003g00002 ATGTCACCCCCACCATTTTTCTTCTCTCTCTCTATTTCCCTTCTCTTTCTCTTCCTCTTAGCACCATTACTCTTAGCTCAATCTCCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTGTTGTCTGCAAAGGCACATTATATCCAAAACTATGCCGTTCCATTCTCTCAGCCATTCGTTCCTTACCTTCTGACCCTTATGGCTATGGCAAGTTCTCCATAAAACAAAGCCTCAAACAGGCAAGGAAACTAGCAAGGGTGTTTGAGGACTTTCTCCGCCGCCACCAATCATCTTCCCTGAACCATGCAGAGGTTGCATCACTTGGTGACTGCAGAGACCTCAACCAGCTCAACGTGGACTACTTAGGGTCCATATCTGAGGAGCTCAAATCGGTGAGCTCCTCAGACACTGAACTGGTTGAGAAAATTGAGAGCTATCTGAGTGCTGTGGCCACCAACCACTACACTTGCTATGATGGGTTGGTTGTGACCAAAAGCAACATTGCCAATGCCCTTGCCGTGCCACTCAAGGATGTGACGCAGTTGTACAGTGTGTCACTTGGGTTGGTCACTCAGGCTCTTGACAGAAACCTCAAAAGGAATAGGACCCGCAAACATGGCCTCCCCACCAAGGCCTTCAAGGTCAGGCAACCACTTGAGAAGCTCATCAAGCTTCTACGCACAAAGTATAGTTGCACAAAATCATCCAATTGCACTAGAACTGAAAGGATTCTTAAAGAAAGTGGAAGCCAAGGAATTTTATTATACGACTTTGTGATTGTGAGCCCTTACGGGGTAGACAACTACACTTCCATTGGAGAGGCTATTGCTGCTGCACCCAATAACACAAAGCCTGAAGATGGATATTTCCTTGTGTATGTTAGAGAGGGATACTATGAGGAATATGTAGTTATTCCCAAAGAAAAGAAGAATATATTGCTAGTTGGAGATGGTATTAACAAGACTATCATCACAGGGAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTGCTGGAGAAAGATTTATAGCAGTGGATGTTACATTTAGAAACACAGCTGGACCTGAAAAACACCAAGCTGTGGCAGTGAGGAACAATGCTGACCTCTCCACATTCTACAGATGCAGCTTTGAAGGATATCAAGACACACTCTATGTTCACTCTTTGAGGCAATTCTATAGGGAATGTGATATCTATGGCACTGTGGACTTCATCTTTGGCAACGCTGCCGTGGTCTTCCAAGGCTGCAACATCTATGCCAGAAAACCAATGCCAAACCAGAAGAATGCTGTCACAGCACAAGGAAGAACTGATCCAAATCAAAACACTGGCATTTCAATCCAAAACTGCACCATTGATGCTGCACTAGATCTGGCTGCAGACTTGAATTCCACAGCTAGTTACTTAGGCCGGCCTTGGAAGGTGTACTCAAGGACTGTCTATCTGCAGTCATATATTGGAAATCTCATTCAGCCTGCTGGGTGGTTAGAGTGGAATGGGACAGTTGGATTAGACACTCTCTTTTATGGTGAGTTCAACAACTATGGACCTGGTTCTAACACTAGCAATAGAGTACAATGGCCTGGTTACTCTCTGTTGAATGCTACTCAAGCTTGGAACTTCACAGTCCTTAATTTTACATTGGGAAATACATGGCTTCCTGACACAGATATACCTTACACTGAAGGACTACTAAGATAG 1743 0.4435 MSPPPFFFSLSISLLFLFLLAPLLLAQSPPSSPSSPSSPSSPSSPSSVVCKGTLYPKLCRSILSAIRSLPSDPYGYGKFSIKQSLKQARKLARVFEDFLRRHQSSSLNHAEVASLGDCRDLNQLNVDYLGSISEELKSVSSSDTELVEKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDVTQLYSVSLGLVTQALDRNLKRNRTRKHGLPTKAFKVRQPLEKLIKLLRTKYSCTKSSNCTRTERILKESGSQGILLYDFVIVSPYGVDNYTSIGEAIAAAPNNTKPEDGYFLVYVREGYYEEYVVIPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVAGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQGCNIYARKPMPNQKNAVTAQGRTDPNQNTGISIQNCTIDAALDLAADLNSTASYLGRPWKVYSRTVYLQSYIGNLIQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSNRVQWPGYSLLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4003g00002 580 Gene3D - 264 580 IPR012334 -
Mupr4003g00002 580 PANTHER PECTINESTERASE 19 568 - -
Mupr4003g00002 580 Pfam Pectinesterase 266 563 IPR000070 GO:0030599|GO:0042545
Mupr4003g00002 580 SUPERFAMILY Pectin lyase-like 265 577 IPR011050 -
Mupr4003g00002 580 FunFam Pectinesterase 262 578 - -
Mupr4003g00002 580 Pfam Plant invertase/pectin methylesterase inhibitor 49 195 IPR006501 GO:0004857
Mupr4003g00002 580 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Mupr4003g00002 580 CDD PMEI-like_3 49 198 - -
Mupr4003g00002 580 SMART PMEI_2 41 196 IPR006501 GO:0004857
Mupr4003g00002 580 NCBIfam pectinesterase inhibitor domain 17 199 IPR006501 GO:0004857
Mupr4003g00002 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 200 IPR035513 -
Mupr4003g00002 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 199 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4003g00002 Mupr-Chr4003 6272 11111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4003g00002 7 579 Carbohydrate Esterase AT3G10720 57.610 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4003g00002 K01051 - gmx:100816503 1008.82