LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4003g00002	ATGTCACCCCCACCATTTTTCTTCTCTCTCTCTATTTCCCTTCTCTTTCTCTTCCTCTTAGCACCATTACTCTTAGCTCAATCTCCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTCCTTCTTCTGTTGTCTGCAAAGGCACATTATATCCAAAACTATGCCGTTCCATTCTCTCAGCCATTCGTTCCTTACCTTCTGACCCTTATGGCTATGGCAAGTTCTCCATAAAACAAAGCCTCAAACAGGCAAGGAAACTAGCAAGGGTGTTTGAGGACTTTCTCCGCCGCCACCAATCATCTTCCCTGAACCATGCAGAGGTTGCATCACTTGGTGACTGCAGAGACCTCAACCAGCTCAACGTGGACTACTTAGGGTCCATATCTGAGGAGCTCAAATCGGTGAGCTCCTCAGACACTGAACTGGTTGAGAAAATTGAGAGCTATCTGAGTGCTGTGGCCACCAACCACTACACTTGCTATGATGGGTTGGTTGTGACCAAAAGCAACATTGCCAATGCCCTTGCCGTGCCACTCAAGGATGTGACGCAGTTGTACAGTGTGTCACTTGGGTTGGTCACTCAGGCTCTTGACAGAAACCTCAAAAGGAATAGGACCCGCAAACATGGCCTCCCCACCAAGGCCTTCAAGGTCAGGCAACCACTTGAGAAGCTCATCAAGCTTCTACGCACAAAGTATAGTTGCACAAAATCATCCAATTGCACTAGAACTGAAAGGATTCTTAAAGAAAGTGGAAGCCAAGGAATTTTATTATACGACTTTGTGATTGTGAGCCCTTACGGGGTAGACAACTACACTTCCATTGGAGAGGCTATTGCTGCTGCACCCAATAACACAAAGCCTGAAGATGGATATTTCCTTGTGTATGTTAGAGAGGGATACTATGAGGAATATGTAGTTATTCCCAAAGAAAAGAAGAATATATTGCTAGTTGGAGATGGTATTAACAAGACTATCATCACAGGGAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTGCTGGAGAAAGATTTATAGCAGTGGATGTTACATTTAGAAACACAGCTGGACCTGAAAAACACCAAGCTGTGGCAGTGAGGAACAATGCTGACCTCTCCACATTCTACAGATGCAGCTTTGAAGGATATCAAGACACACTCTATGTTCACTCTTTGAGGCAATTCTATAGGGAATGTGATATCTATGGCACTGTGGACTTCATCTTTGGCAACGCTGCCGTGGTCTTCCAAGGCTGCAACATCTATGCCAGAAAACCAATGCCAAACCAGAAGAATGCTGTCACAGCACAAGGAAGAACTGATCCAAATCAAAACACTGGCATTTCAATCCAAAACTGCACCATTGATGCTGCACTAGATCTGGCTGCAGACTTGAATTCCACAGCTAGTTACTTAGGCCGGCCTTGGAAGGTGTACTCAAGGACTGTCTATCTGCAGTCATATATTGGAAATCTCATTCAGCCTGCTGGGTGGTTAGAGTGGAATGGGACAGTTGGATTAGACACTCTCTTTTATGGTGAGTTCAACAACTATGGACCTGGTTCTAACACTAGCAATAGAGTACAATGGCCTGGTTACTCTCTGTTGAATGCTACTCAAGCTTGGAACTTCACAGTCCTTAATTTTACATTGGGAAATACATGGCTTCCTGACACAGATATACCTTACACTGAAGGACTACTAAGATAG	1743	0.4435	MSPPPFFFSLSISLLFLFLLAPLLLAQSPPSSPSSPSSPSSPSSPSSVVCKGTLYPKLCRSILSAIRSLPSDPYGYGKFSIKQSLKQARKLARVFEDFLRRHQSSSLNHAEVASLGDCRDLNQLNVDYLGSISEELKSVSSSDTELVEKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDVTQLYSVSLGLVTQALDRNLKRNRTRKHGLPTKAFKVRQPLEKLIKLLRTKYSCTKSSNCTRTERILKESGSQGILLYDFVIVSPYGVDNYTSIGEAIAAAPNNTKPEDGYFLVYVREGYYEEYVVIPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVAGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQGCNIYARKPMPNQKNAVTAQGRTDPNQNTGISIQNCTIDAALDLAADLNSTASYLGRPWKVYSRTVYLQSYIGNLIQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSNRVQWPGYSLLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLR	580

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4003g00002	580	Gene3D	-	264	580	IPR012334	-
	Mupr4003g00002	580	PANTHER	PECTINESTERASE	19	568	-	-
	Mupr4003g00002	580	Pfam	Pectinesterase	266	563	IPR000070	GO:0030599\|GO:0042545
	Mupr4003g00002	580	SUPERFAMILY	Pectin lyase-like	265	577	IPR011050	-
	Mupr4003g00002	580	FunFam	Pectinesterase	262	578	-	-
	Mupr4003g00002	580	Pfam	Plant invertase/pectin methylesterase inhibitor	49	195	IPR006501	GO:0004857
	Mupr4003g00002	580	ProSitePatterns	Pectinesterase signature 2.	412	421	IPR033131	-
	Mupr4003g00002	580	CDD	PMEI-like_3	49	198	-	-
	Mupr4003g00002	580	SMART	PMEI_2	41	196	IPR006501	GO:0004857
	Mupr4003g00002	580	NCBIfam	pectinesterase inhibitor domain	17	199	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4003g00002	Mupr-Chr4003	6272	11111	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4003g00002	7	579	Carbohydrate Esterase	AT3G10720	57.610	0.0	712

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4003g00002	K01051		-	gmx:100816503	1008.82

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