Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4003g00001 ATGGCACTGGGAAATATAAAACAATCTCTGATGCACTTAAAAATGTCCCTAACAAGAGACAAGAGTGACAAGAGGACTGTGATCTATGTGAAGAGAGGGGTTTACTATGAAAATGTGAAGGTAGAGAAGACCAAATGGAATGTGATGATGATTGATGATGGTATGACTTCTACTATTGTATCTGGCAGCCATAATTTTGTGGATGGCATACCAACATTTTCAACTGCAACATTTGGTGTATTTGGAAGGAAATTCATAGCTAAAGGTATGGGTTTTCGCAACACAGCTGGGCCAGAGAAGCATCAAGCAGTGGCACTAATGACAAGTGCTGATCAAGCAATTTACTATAGGTGTCACATTGATGCTTATCAGGACACACTCTATGCTCATTCCAACCGCCAATTCTATAGAGAATGCAACATCTATGGCAAAGTTGATTTCATTTTTGGCAACTCTGTAGTTGTGATCCAAAACTACAATATTAGGCCAAAGTTACCTATGCATGGCCAGCAGAACACAATCACAGCTCAGGGAAAATTTGACCCTAACATGAACACTGGTATCTCCATTCAATATTGCAACATTTCACCCTTTGGGAACTTGAGATCTGTCCAGACATACCTTGGAAGACCCTGGAAGAATTACTCAACCACAGTGTACATGAGATCTAGAGTGGAAAGCTTTGTGAACCCCAGTGGCTGGTTACCATGGGTAGGGAACTCAGCACCAGACACCATTTTCTATGCAGAGTTTCAGAATGTTGGATCAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTACTGGTAAACAAGCCAGCAAATTTACTATCAAGGCTTTTCTACAAGGAGACAAATGGATTTCTGCATCAGGTGCCCCATTTAAGTCTAATCTGTGA 912 0.4112 MALGNIKQSLMHLKMSLTRDKSDKRTVIYVKRGVYYENVKVEKTKWNVMMIDDGMTSTIVSGSHNFVDGIPTFSTATFGVFGRKFIAKGMGFRNTAGPEKHQAVALMTSADQAIYYRCHIDAYQDTLYAHSNRQFYRECNIYGKVDFIFGNSVVVIQNYNIRPKLPMHGQQNTITAQGKFDPNMNTGISIQYCNISPFGNLRSVQTYLGRPWKNYSTTVYMRSRVESFVNPSGWLPWVGNSAPDTIFYAEFQNVGSGASTKNRVKWKGLRTITGKQASKFTIKAFLQGDKWISASGAPFKSNL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4003g00001 303 Gene3D - 14 303 IPR012334 -
Mupr4003g00001 303 FunFam Pectinesterase 5 303 - -
Mupr4003g00001 303 PANTHER PECTINESTERASE 21 293 - -
Mupr4003g00001 303 Pfam Pectinesterase 17 289 IPR000070 GO:0030599|GO:0042545
Mupr4003g00001 303 SUPERFAMILY Pectin lyase-like 20 300 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4003g00001 Mupr-Chr4003 3960 5642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4003g00001 20 303 Carbohydrate Esterase AT3G10710 64.437 4.00e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4003g00001 - - gmx:100811152 534.643