Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4001g00005 ATGAACAATAGCAGCAACAAGAAGGATGATGAGGGTGGGTTTGACGCAGGTGGGTACACATATGGAGTAGCTTTTGTAATTGGGTTTATATTCTTACTTGTGACTATGGGTTTTGCGTGTGTGCGGCTTCGCATGTCTCGAGGTCCTAATATGCTCAATATTTTGGCTGGTATTCCACCATCTCATGATGCAAGAAGAGAAGAAGAATCGGGTGAACAAGGCCTAGGCCTTCATGACATTGACACCAGTTTTGAAGACTACCCCAAATTTCTCTACTCTCAAATAGACAAAAAGGGTTCAACTTCAACCAATAGCTGCTCCATTTGCTTAGGGGACTACAAAGAAAGTGACATTTTGAGGTTACTTCCTCACTGTGACCATCTTTTCCACCTTGCTTGTGTTGATCCATGGCTTAGATTGCATTCAACTTGTCCCATATGTAGAAAATCATCGCTTCACCCTCTCCCTGTTGTATTCATCGCTTCGTACGTGTAG 495 0.4303 MNNSSNKKDDEGGFDAGGYTYGVAFVIGFIFLLVTMGFACVRLRMSRGPNMLNILAGIPPSHDARREEESGEQGLGLHDIDTSFEDYPKFLYSQIDKKGSTSTNSCSICLGDYKESDILRLLPHCDHLFHLACVDPWLRLHSTCPICRKSSLHPLPVVFIASYV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4001g00005 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 152 IPR013083 -
Mupr4001g00005 164 SMART ring_2 106 147 IPR001841 -
Mupr4001g00005 164 SUPERFAMILY RING/U-box 85 154 - -
Mupr4001g00005 164 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 154 IPR045899 -
Mupr4001g00005 164 Pfam Ring finger domain 104 148 IPR001841 -
Mupr4001g00005 164 CDD RING-H2_EL5-like 105 148 - -
Mupr4001g00005 164 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4001g00005 Mupr-Chr4001 27439 28091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4001g00005 12 164 C3H Transcription Factor Family AT2G35910 41.071 3.82e-28 102