Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4001g00002 ATGGGGTATCTCTTTCCGCTTCTATGTTTTTCTACCTTGTTATATGCTGCTTCTGCCTTGAACTCTGATGGCTTGGCTTTGTTGTCCCTCTTGAGGGGCTGGACTGTTGTGCCTGGTCACATTAACTCCACGTGGAAGGCTTCTGATTCCACTCCATGCTCATGGCCAGGAGTGCATTGTGATCATGCCCATAATGTGGTTTCTCTAAACCTCACTAACTATTCCATTTTTGGGCAATTAGGACCTGAACTTGGACGTTTGATTCACTTGCAAACCATAGACTTATCATATAATGATCTCTTTGGAAAAGTTCCCCCAGAATTAAACAATTGTACCATGCTTGAGTACTTGGACCTTTCTGTAAATAACTTTAGCGGAGGAATACCTGAGAGCTTCAAAAACTTGCAAAATTTGAAGCATGTGGACCTTTCAACTAATCTTCTGAATGGTGAAATTCCTCAATCCTTGTTTGAAATTCCTCACCTGGAAGAAGTGTTTCTTAACAACAACAATTTAAATGGTTCCATTCCCTCAAGTATTGGGAATATCACTGAGCTTGATTCACTGGATCTTTCTTCTAATCAGCTGTCAGGGACAATTCCCATGTCCATTGGAAATTGTAGTAAATTAGAGTTTCTGTATTTGGAAAGGAATCAATTACACGGAGTTATTCCTGAGAGTCTAAATAATCTCAAAAATCTTTTTGACTTAAATCTTGGTTCTAATAATCTAGGCGGTACCATTCAACTGGGATCTGGAGATTGCAAAATGTTATCTTATTTGAGTCTTTCTTACAATGCATTTAGTGGGGGTATACCATCAAGCTTGTGGAATTGTAGTGGTCTGATAGAGTTTTATGCTGCAGGGAGTAACTTAGTTGGCAGTATACCATCAACCTTAGGCCTCCTGCACATGCTTCAGATTCTAATAATTCCAGAGAACCTATTTTCTGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGAAACAGTTACATTTGAACTCCAATGGACTTGAGGGAGAAATTCCTAGTGAATTGGGAAAGTTGAGTACACTACGTGGTCTTAGATTGTATGAAAACCTTTTGACAGGAGAAATTCCACTTGGCATATGGAAAATTCAAAGCCTTGAGCAGATACAAGTGTACAATAATAGTCTTTCAGGTGAGCTACCTTCTGAGATGACAGAGCTCAAACATCTTAAGAATATCTCATTGTTTAACAACTTGTTCTCTGGAGTCATACCTCAAGGCTTAGGAATCAATAGCAGTTTGGTGGAGGTAGACTTCATGTATAATAATTTCACTGGTACCCTCCCACCAAATCTTTGTTATGGAAAACAACTGGTCAAGCTGAATATGGGTAGCAATCAATTTTATGGTAGCATACCTCCTGATGTAGGAAGGTGTACAACTCTTAGAAGGGCGAGACTTGAAGAAAATAATTTCACTGGGCCACTTCCTGATTTTGAAACTACTCCAAATCTCTCTTACATGAGCATCAACAACAATAATATCAGTGGAGCACTTCCATCAAGTTTGGGAAACTGCACAAATCTCTCTCTTTTAGATTTATCCATGAACAGCTTCACAGGTCTTGTACCCTCAGAGCTAGGAAACCTCTTGAATCTCCAGTCTTTGGATCTTTCTCACAATAACTTGCAAGGTCCTTTGCCACATCAGCTGTCAAATTGTGCCAAAATGATCAAGTTTAATGTTGGATTCAACTCTTTGAATGGTTCTTTTCCATCAAGTTTTCGAAACTGGACAACATTAACAACTTTAATTCTCTCAGAGAATCGTTTTAATGGTGGTATCCCAACTTTCTTGTCAGAATTTAAAAAGCTTAATGAGTTACGGCTTGGTGGAAATGTGTTTGGTGGAAACATTCCTAAATCAATTGGAGAACTGGTGAATCTGTTCTATGAGCTAAATCTAAGTGCTAATGGACTGACAGGTGAGCTTCCTAGGGAGATTGGAAACCTGAAGAATCTAATAAAACTGGATCTATCTTGGAATAATTTGACTGGAAGTATACAAGTTCTTGATGAGCTCAGTTCATTATCTGAATTCAACATCTCGTATAATTCTTTTGAAGGTCTTGTACCACAACAGCTAACAGAGTTACCAAATTCTCCTTTAGCATTTTTGGGCAATCCTGGCCTATGTGGCTCGAATTTCACTGAGAGCAGCTATTTAAGGCCATGTGACACACATTCAAAAAAGCTCAGTAAAGTTGCAACTGTGATGATAGCACTTGGATCCTCAATATCTGTTGTTCTGCTGCTGGGGTTAATTTATATATTCTTTATCAGAAAAATTAATCAGGAAGCCACAACCAACGAGGAAGCTGATTCTCCATCCCTTCTCAATCAGGTGATGGAAGCTACAGAAAATCTAAATGATCATTATATTATTGGCAGAGGAGCTCAAGGAGTTGTATACAAAGCAGCACTAGGTCCACACAAAATTTTGGCTATAAAGAAGTTTGTATTTGCTCATGATGAAGGGAAAAGCTCAAGCATGACCAGAGAAATTCAAACCCTTGGAAAGATTAGGCATCGAAATTTGGTCAGATTGGAAGGGTGCTGGTTGAGAGAAAACTATGGTCTAATTGCATACAAGTACATGCCAAATGGAAGCCTTCATGATGCTTTGCATGAGAGGAATCCACCCCACTATTTAGAATGGAATGTTCGGAATAAGATAGCTGTTGGAATTGCTCATGGATTGGCCTATCTCCATTATGACTGTGATCCTGTCATAGTGCACAGAGACATCAAAACAAGCAATGTACTTCTAGATTCTGAAATGGAGCCTCATATTGCAGATTTTGGAATTGCCAAGCTTTTGGATCAGACTTCTACCTCAACACAGTCAGCACTTGTTACTGGTACAATTGGTTATATAGCACCAGAGAATGCTTACACAACAACAAAGGGTAAGGAATCCGATGTATACAGTTATGGGGTAGTTTTGCTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCATCATTTATGGAAGGAACAGATTTAGTTAATTGGGCTAGATCTGTCTGGGAGGAAATGGGAGTTGTTGATGAAATTGTTGATTCAGAGCTTGCTGCTGAAATTTCAAATCCTGATGTGATGAAACATGTTACCAAGGTGCTTTTGGTGGCTTTGAGATGCACTGAAAAGGATCCGCGTAATAGGCCTACTATGAGGAATGTTATCAAGCATTTGTAG 3234 0.3915 MGYLFPLLCFSTLLYAASALNSDGLALLSLLRGWTVVPGHINSTWKASDSTPCSWPGVHCDHAHNVVSLNLTNYSIFGQLGPELGRLIHLQTIDLSYNDLFGKVPPELNNCTMLEYLDLSVNNFSGGIPESFKNLQNLKHVDLSTNLLNGEIPQSLFEIPHLEEVFLNNNNLNGSIPSSIGNITELDSLDLSSNQLSGTIPMSIGNCSKLEFLYLERNQLHGVIPESLNNLKNLFDLNLGSNNLGGTIQLGSGDCKMLSYLSLSYNAFSGGIPSSLWNCSGLIEFYAAGSNLVGSIPSTLGLLHMLQILIIPENLFSGKIPPQIGNCKSLKQLHLNSNGLEGEIPSELGKLSTLRGLRLYENLLTGEIPLGIWKIQSLEQIQVYNNSLSGELPSEMTELKHLKNISLFNNLFSGVIPQGLGINSSLVEVDFMYNNFTGTLPPNLCYGKQLVKLNMGSNQFYGSIPPDVGRCTTLRRARLEENNFTGPLPDFETTPNLSYMSINNNNISGALPSSLGNCTNLSLLDLSMNSFTGLVPSELGNLLNLQSLDLSHNNLQGPLPHQLSNCAKMIKFNVGFNSLNGSFPSSFRNWTTLTTLILSENRFNGGIPTFLSEFKKLNELRLGGNVFGGNIPKSIGELVNLFYELNLSANGLTGELPREIGNLKNLIKLDLSWNNLTGSIQVLDELSSLSEFNISYNSFEGLVPQQLTELPNSPLAFLGNPGLCGSNFTESSYLRPCDTHSKKLSKVATVMIALGSSISVVLLLGLIYIFFIRKINQEATTNEEADSPSLLNQVMEATENLNDHYIIGRGAQGVVYKAALGPHKILAIKKFVFAHDEGKSSSMTREIQTLGKIRHRNLVRLEGCWLRENYGLIAYKYMPNGSLHDALHERNPPHYLEWNVRNKIAVGIAHGLAYLHYDCDPVIVHRDIKTSNVLLDSEMEPHIADFGIAKLLDQTSTSTQSALVTGTIGYIAPENAYTTTKGKESDVYSYGVVLLELISRKKALDPSFMEGTDLVNWARSVWEEMGVVDEIVDSELAAEISNPDVMKHVTKVLLVALRCTEKDPRNRPTMRNVIKHL 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4001g00002 1077 ProSiteProfiles Protein kinase domain profile. 801 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4001g00002 1077 Pfam Leucine rich repeat 160 220 IPR001611 GO:0005515
Mupr4001g00002 1077 Pfam Leucine rich repeat 495 555 IPR001611 GO:0005515
Mupr4001g00002 1077 ProSiteProfiles Leucine-rich repeat profile. 665 687 IPR001611 GO:0005515
Mupr4001g00002 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Mupr4001g00002 1077 Gene3D Transferase(Phosphotransferase) domain 1 878 1077 - -
Mupr4001g00002 1077 Gene3D Ribonuclease Inhibitor 185 250 IPR032675 -
Mupr4001g00002 1077 SUPERFAMILY Protein kinase-like (PK-like) 790 1077 IPR011009 -
Mupr4001g00002 1077 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 322 420 - -
Mupr4001g00002 1077 Gene3D Ribonuclease Inhibitor 20 179 IPR032675 -
Mupr4001g00002 1077 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 462 1071 - -
Mupr4001g00002 1077 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 179 - -
Mupr4001g00002 1077 PRINTS Leucine-rich repeat signature 542 555 - -
Mupr4001g00002 1077 PRINTS Leucine-rich repeat signature 186 199 - -
Mupr4001g00002 1077 SUPERFAMILY RNI-like 416 711 - -
Mupr4001g00002 1077 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 448 733 - -
Mupr4001g00002 1077 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Mupr4001g00002 1077 Gene3D Ribonuclease Inhibitor 491 745 IPR032675 -
Mupr4001g00002 1077 Gene3D Ribonuclease Inhibitor 251 490 IPR032675 -
Mupr4001g00002 1077 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 769 877 - -
Mupr4001g00002 1077 SMART serkin_6 801 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4001g00002 1077 SMART LRR_typ_2 686 709 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 135 159 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 183 207 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 231 255 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 87 111 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 208 230 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 542 566 IPR003591 -
Mupr4001g00002 1077 SMART LRR_typ_2 638 663 IPR003591 -
Mupr4001g00002 1077 SUPERFAMILY L domain-like 40 177 - -
Mupr4001g00002 1077 Pfam Leucine Rich Repeat 114 135 IPR001611 GO:0005515
Mupr4001g00002 1077 Pfam Leucine Rich Repeat 89 111 IPR001611 GO:0005515
Mupr4001g00002 1077 Pfam Protein kinase domain 804 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4001g00002 1077 FunFam Serine/threonine-protein kinase-like protein CCR4 878 1077 - -
Mupr4001g00002 1077 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 180 308 - -
Mupr4001g00002 1077 SUPERFAMILY RNI-like 152 485 - -
Mupr4001g00002 1077 Gene3D Phosphorylase Kinase; domain 1 771 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4001g00002 Mupr-Chr4001 7057 10586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4001g00002 11 1077 Receptor kinase-like Gene Family AT1G73080 52.150 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr4001g00002 Pkinase 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4001g00002 - - gmx:100817655 1761.12