Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3996g00001 AGAGTTTCAGCGGGGATTCACAACCCAGCACCGAATCCTCCTTCTCCAGTGAAGCTGAATACCGAAAATCCTCAACAGGTGGTGATTGCCAACGGCATTGTTTCCCTCAATTTGTCAAATCCCGAGGGCTATATCACTGGAATATATACTGGAATTAACAATGTACTTGAGTCTACAAACAAAGAAGGAGATAGAGGGTACTTCGATGTTGTTTGGAACGAACCAGAAAAACCTGGCCTTTTTGACAGGGAATTCCAGACAAGTTTACTATTGAAACTGTACTGCAGAATCGAAGGGACAAATTTCTCAGTCATTGTAGCAAACGAGAGTATAGTGGAGGTTTCATTTTTAAGAACATGGACAGCTTCCATGAATGGCTCATATGTCCCCATAAACATAGATCAAAGGTACATATTGCGAAGAGGGGATTCTGGATTTTATGCATATGTAGTATTTGACAGACCACCAGGATTACCTGCAGCCGAGGTTTATCAAGTTAGGTTTGTTTTCAAACTCGACCAAGCCAGGTTCCACTATATGGCCATATCTGATACTAGGCAAAGGGACATGCCAACTGCCAAGGATAGAATAACGGGTCAACCCCTGGCGTATCCTGAAGCTGTTATCTTAACTCATCCATCTGACGAACGATTTAAGGGAGAGGTGGATGACAAATACCAATACTCGAGTGAGAACAATGATAGCCTTGTTTATGGCTGGATTACCGAGGATGATTTACCACCCCAGGGTTTCTGGACAATAACGCCCAGTAATGAGTTCCGCAATGCTGGGCCCATTAAACAAGACCTCACCTCTCATGTTGGCCCAACTACTCTTAACATGTTTGTGAGCACTCACTATGGTGGCAAGGAGGTAAACATTTTATTTGGTGAAGGGGAGACTTATAAAAAGGTTTTCGGCCCAGTTTTTATCTACCTTAACTCTGTTTCAAACAAGGACCAATTTCAGTCTCTATGGACAGATGCTGTACAACAGTTATCCTATGAAGTCCAAAAATGGCCTTATGATTTCGTTGGATCAAAAGATTTCCTTCCAGCCAATCAACGGGGAACAGTGGCAGGACTATTACAAGTCCAAGATGGGGAAGGGAAAGTTCAACCTGCTAACAATGCTTACGTTGGTCTAGCTTTGCCTGGAGATGCAGGATCATGGCAGACAGAATCCAAGGGTTATCAATTCTGGACTCGAACTGATAAAGACGGAAACTTCTTAATTAAAAATGTTGTACCTGGAGATTACAACTTGTATGCATGGGTTCCGGGTTTTATTGGAGATTATATATATACAACTAAAATTACCACCAATCCAGGGGACAACATCAAATTGGGCACACTTGTATATTATCCTCCAAGAAATGGTCCTACTCTATGGGAAATTGGGATCCCAGATCGATCAGCTGCGGAATTCTATGTACCAGACGCAAACCCCAAGTTCGTGAATAAATTATACGCCAACGATACCCGAGACAAGTTTAGGCAATACGGCTTGTGGGAACGTTACAGTGAGTTATATCCAAACCATGATCTGGTTTACACGGTTGGTGATGCTGACTATCACAGGGATTGGTTTTTTGCTCAAGTATCAAGGGTGACGGTAGATAAGACATATGTGCCAACCACATGGCAGATTCATTTCCAACTTCAAAATATCACAATGGAAGGAAACTACACATTACAATTAGCCCTGGCATCTACCACTAATTCTAGATTGGAGGTTAGGTTCAATGACCCGAATGTGAACCTTCCCCACTTCTCAACAGGGCTAATAGGCGGTGACAATGCCATAGCAAGGCACGGCATCCATGGATTGTCTAGGCTATATACTGTAGTTGTAGGTAGTAATCAATTGGTAGAAGGAAATAATATAATCTATTTGACACAGTCACATGTCGTAGGTCTTTTCGAAGGAGTTATGTATGATTATATCCGCTTTGAAAGTCCTCCAACTAAAGCTACT 1977 0.4224 RVSAGIHNPAPNPPSPVKLNTENPQQVVIANGIVSLNLSNPEGYITGIYTGINNVLESTNKEGDRGYFDVVWNEPEKPGLFDREFQTSLLLKLYCRIEGTNFSVIVANESIVEVSFLRTWTASMNGSYVPINIDQRYILRRGDSGFYAYVVFDRPPGLPAAEVYQVRFVFKLDQARFHYMAISDTRQRDMPTAKDRITGQPLAYPEAVILTHPSDERFKGEVDDKYQYSSENNDSLVYGWITEDDLPPQGFWTITPSNEFRNAGPIKQDLTSHVGPTTLNMFVSTHYGGKEVNILFGEGETYKKVFGPVFIYLNSVSNKDQFQSLWTDAVQQLSYEVQKWPYDFVGSKDFLPANQRGTVAGLLQVQDGEGKVQPANNAYVGLALPGDAGSWQTESKGYQFWTRTDKDGNFLIKNVVPGDYNLYAWVPGFIGDYIYTTKITTNPGDNIKLGTLVYYPPRNGPTLWEIGIPDRSAAEFYVPDANPKFVNKLYANDTRDKFRQYGLWERYSELYPNHDLVYTVGDADYHRDWFFAQVSRVTVDKTYVPTTWQIHFQLQNITMEGNYTLQLALASTTNSRLEVRFNDPNVNLPHFSTGLIGGDNAIARHGIHGLSRLYTVVVGSNQLVEGNNIIYLTQSHVVGLFEGVMYDYIRFESPPTKAT 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3996g00001 659 Gene3D - 351 449 - -
Mupr3996g00001 659 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 19 655 - -
Mupr3996g00001 659 MobiDBLite consensus disorder prediction 1 20 - -
Mupr3996g00001 659 Pfam Rhamnogalacturonate lyase family 17 222 IPR010325 -
Mupr3996g00001 659 SUPERFAMILY Galactose-binding domain-like 459 652 IPR008979 -
Mupr3996g00001 659 Pfam Polysaccharide lyase family 4, domain II 376 448 IPR029413 -
Mupr3996g00001 659 CDD RGL4_M 355 452 IPR029413 -
Mupr3996g00001 659 CDD RGL4_C 464 652 - -
Mupr3996g00001 659 SUPERFAMILY Galactose mutarotase-like 118 318 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mupr3996g00001 659 Gene3D - 460 652 - -
Mupr3996g00001 659 SUPERFAMILY Starch-binding domain-like 351 450 IPR013784 GO:0030246
Mupr3996g00001 659 Pfam Polysaccharide lyase family 4, domain III 462 650 IPR029411 -
Mupr3996g00001 659 Gene3D - 93 335 IPR014718 GO:0030246
Mupr3996g00001 659 CDD RGL4_N 20 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3996g00001 Mupr-Chr3996 16584 20145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3996g00001 27 656 Polysaccharide Lyase AT1G09910 53.701 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3996g00001 K18195 - gmx:100781089 1034.25