Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3995g00004 ATGACCGAAGAAGACCGCTCCGCCGAGCCAACCGTCCGCAATGGCGTCGCCGTGACGAAGCTCGGCGGCGAGGAGTTGGAACTCGAGGGCGGCGATGGTGAGGTGATGGTGGTCGGCGACGGTTCCGTGGCCGGAAGAGTGAAGGGACCGTGGTCGCCGGAGGAGGACGCGGTTCTGAGCCGATTGGTGGCGCAGTTCGGGGCGAGGAACTGGAGCATGATCGCCCGGGGGGTACCGGGACGCTCCGGCAAGTCGTGCCGTCTTCGGTGGTGTAATCAGCTTGACCCTTACGTGAAACGCAAGCCCTTCACTGGTAATATCGGTTCCCCACTGATACCGATGTTTCTAGAATTAGAGGAAGAGGATAGCATCATAGTTTCAGCCCATGCAATTCACGGAAACAAATGGGCGGCAATTGCTAAGCTTCTTCCAGGTAGAACAGATAATGCGATAAAAAATCACTGGAATTCTACACTGAAGCGCAGGTGTATGGACCTGGGTAGATATGTCCTGGCAAATGCTGATGTGATCGAAGATGGTAGCTTTGAAAAAACAAAAGCATCCTCTGAAGAGACCATGTGTATTGGGGATATCAATTCATTGAATCGTTCAGAAGCCAGAAATCTCATGATGGATAATGAAAATAAACCTCCAAGAAAAGATGATGGTAAAGTGGAGGAACATCCTACCCTTTATCGACCAGTTGCACGTATTAGTGCATTTAGTGTTTATAATCCTCCAGGCAGGTCAACAACTGGATCATGTTCAAAGATGTTCCCAAGACAGAGCCCTTTGATACAATCCCCCAAACCAGACATAGGATCCTGCAAGTTATTTGATGGTATTGATTGTGAGTCCATGATTCCATTGCAATGCGGTCATGGCTGCTGCACAGTGGAATTGAGGGAAGACCATTCGCATGATTCACTTCTAGGTCCCGAGTTTGTTGACAATTTGGAGTCACCTTTCTCTAGTCATGCATTGATTTCAATAGCTACAGACTTAAACAATATAGCTTGGATCAAGAGTGGCCTTGAGAATTATACTGCTGGAGTAACTGAGAATGCTGCAAACTTGACAGCATCTCAAGGGGTTGCCACTGCTTCACAAACAAACTTCTTACAACAAGATCTAAAGAATGGCTACGGGCACTTTGAGGAGGGACCTGGCAAGTTTTTGGGTGCGATGCAAGAAGCGTCTAGGCAACATTTTGCATTGCCTGCGAAAGTTTGA 1233 0.4834 MTEEDRSAEPTVRNGVAVTKLGGEELELEGGDGEVMVVGDGSVAGRVKGPWSPEEDAVLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPYVKRKPFTGNIGSPLIPMFLELEEEDSIIVSAHAIHGNKWAAIAKLLPGRTDNAIKNHWNSTLKRRCMDLGRYVLANADVIEDGSFEKTKASSEETMCIGDINSLNRSEARNLMMDNENKPPRKDDGKVEEHPTLYRPVARISAFSVYNPPGRSTTGSCSKMFPRQSPLIQSPKPDIGSCKLFDGIDCESMIPLQCGHGCCTVELREDHSHDSLLGPEFVDNLESPFSSHALISIATDLNNIAWIKSGLENYTAGVTENAANLTASQGVATASQTNFLQQDLKNGYGHFEEGPGKFLGAMQEASRQHFALPAKV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3995g00004 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 163 IPR017930 -
Mupr3995g00004 410 SMART sant 47 96 IPR001005 -
Mupr3995g00004 410 SMART sant 119 161 IPR001005 -
Mupr3995g00004 410 ProSiteProfiles Myb-like domain profile. 119 159 IPR001005 -
Mupr3995g00004 410 PANTHER MYB PROTEIN-RELATED 48 216 - -
Mupr3995g00004 410 CDD SANT 50 92 IPR001005 -
Mupr3995g00004 410 Pfam Myb-like DNA-binding domain 119 158 IPR001005 -
Mupr3995g00004 410 Pfam Myb-like DNA-binding domain 48 94 IPR001005 -
Mupr3995g00004 410 FunFam MYB transcription factor 48 99 - -
Mupr3995g00004 410 Gene3D - 118 190 - -
Mupr3995g00004 410 CDD SANT 119 159 IPR001005 -
Mupr3995g00004 410 Gene3D - 47 99 - -
Mupr3995g00004 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 98 IPR017930 -
Mupr3995g00004 410 ProSiteProfiles Myb-like domain profile. 48 94 IPR001005 -
Mupr3995g00004 410 SUPERFAMILY Homeodomain-like 45 155 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3995g00004 Mupr-Chr3995 33156 37464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3995g00004 43 347 MYB Transcription Factor Family AT3G55730 48.071 1.17e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr3995g00004 Myb_DNA-binding 3.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3995g00004 K09422 - gmx:100781228 635.18