Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3995g00003 ATGTTGGTCACTGAGGATAAGTCTCATGTTGTTGTTGCTATAGACAATGGCTGTTCTCACCGGAGCTCGGCCGCCGGTGAGGGATGCTCCGACGCCGGCGACCGGTCAGATGAGGAGCAGAGGTCCTCCCATGATTCTGGCAATGAGATTGTGGGAGTATGTGAGAAGGAGAGAGGATCCTCTGCATCAGAGTGTTCAGTGGAGGTGGATCTGGAGGAGGGTGCAGTTCCTGAGGTTAAGGTGCATTTGGATAATGTGGAGAGGGATTGTAGAATTTGCCACCTCAGCATGGATATGACCAACCATGAATCTGGGACTCCCATTGAGCTGGGATGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAGCAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGAAATAAAACTTGTGAAATCTGTGGATCAATTGCACGCAATGTAGCTGGAGCTATTGAAATTCAAATGACAGAACAGTGGAATGAGGGAAATGAAGGTCCCATGGTAGCGGCATCTGGACCTGTGGCACAGGCAGAAACTCGAAATTTCTGGCAGGGTCACCGTTTTCTGAATTTCCTGCTAGCCTGTATGTTGACTATTTAA 603 0.4925 MLVTEDKSHVVVAIDNGCSHRSSAAGEGCSDAGDRSDEEQRSSHDSGNEIVGVCEKERGSSASECSVEVDLEEGAVPEVKVHLDNVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIARNVAGAIEIQMTEQWNEGNEGPMVAASGPVAQAETRNFWQGHRFLNFLLACMLTI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3995g00003 200 SMART ringv_2 89 142 IPR011016 GO:0008270
Mupr3995g00003 200 PANTHER ZINC FINGER, RING-CH-TYPE 16 199 - -
Mupr3995g00003 200 MobiDBLite consensus disorder prediction 31 45 - -
Mupr3995g00003 200 ProSiteProfiles Zinc finger RING-CH-type profile. 82 148 IPR011016 GO:0008270
Mupr3995g00003 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 150 IPR013083 -
Mupr3995g00003 200 MobiDBLite consensus disorder prediction 21 50 - -
Mupr3995g00003 200 Pfam RING-variant domain 90 141 IPR011016 GO:0008270
Mupr3995g00003 200 SUPERFAMILY RING/U-box 87 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3995g00003 Mupr-Chr3995 25157 29175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3995g00003 34 198 C3H Transcription Factor Family AT5G05830 61.078 3.73e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3995g00003 - - gmx:100818979 338.961