Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3992g00001 ATGGAGGAAGCGAAGGAAAAGAATTGGAGAATGGAGGTGGAAGAGAAGCTGAAGAGGCTGCAATCTCTTCTCTTCGGTGCTGAGCGCGCTCTCGAAAACAATGACTTCTCCTCCGCTTACGTCCTCGCGCTTCGTCTCCTCGGATTCCTCGACGCGCACTGCCACTCCGACGTCGACGAAGCCTTCGTCCAACCCATTCGCCGCGACGCACTCGCCAAGCTCCACTCTGCTCGTCGATCCCTCACTCCTCAATCTGATCGCCAAGCTTTTGAGCAAGCAAAGAAATCTCCAGGATGCATTTTTGGCACAACAGGAGATATTGACATTGAGAAGATTAGGAACTCGAAGTACTTTCGTGCTCTTGTTGATCAACTGGGGAAACAGGACAAAGCAGGTATCAAAGCCTCGAAGCAAATGGTGCAAACAAAGTTGCCATCCATGTATGGGAAAAGCAGCTTGAGGACTAGTAACAGTTCCAAGAGCTTTTTGAACATGAAAAATAATAGCTCTGAGGACTGCATGAATCTTGATAGGCCTCAATCTCATGCCAGCCATACAAATGGTCGTGGTGTCTCTTCTATCTTGCAAGTTGAACCAGAAGAAAGAGCTTTTGGAAACACATTCTCCACAAAACGTGTACACATGGAAAATACTAGCCCGAGAGTTGGTTATGTGAAGTCTCTGTCAAGCAAGGAGGAAGTTAATCCTGATGTTTGTGGCAACGGGTTTGTTACTGCCAGAGCTAAACTGGAAATGGAAGCAAAGCAGAGGCGAGGAGTAGGTGGTTCACCCAGTGCTTCTGTCTCACCACAATGTGATAACAATCCTGCCAACAGGTTGTATGGTGGGAGATCATATGGTGTTTCACGACGTGGCATCCGTGGTAATTTTGTTCCCCCTATTAAATCCAATGGGAACAATGTTGGAAATATGAGTACACGTATTGCTGCAAAAAATGATGATTCTTTAGATGACTCTACAAAGAAATGTTTGGAAATCCTGTGTGGTCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTTATTGAACATGTTAGTAATGAGATTATGGATAGAGACCCCAATGTCCGGTGGAATGATATTGCTGGATTGGAGCATGCCAAGAAATGTGTTACTGAGATGGTCATATATCCTTTGCAACGTCCTGACATATTCAAGGGCTGTCGTTCCCCTGGGAGGGGTCTGCTTCTGTTTGGTCCACCGGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCGAAGGCAACCTTCTTTTACATATCTGCAAGTTCGTTGACTAGCAAGTGGATTGGTGAAGGTGAAAAGCTAGTAAGAGCCCTTTTCGGAGTTGCCAGTTGTCGCCAACCAGCAGTAATTTTTGTTGATGAAATAGATTCCCTCCTGTCTCAGCGTAAGTCAGATGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAGTTTCTCATTGAAATGGAAGGTTTTGACAGTGGTAGCGAGCAAATTCTGCTAATAGGGGCAACAAATCGTCCCCAAGAACTAGACGAAGCAGCAAGAAGGAGACTTACTAAAAGACTTTATATTCCCCTACCGTCCTCAGAGGCAAGAGCTTGGATTGTACGTAACCTTCTAGAAAAAGATGGACTATTCAAGCTATCAAGCGAGGAAATGGATATGATATGCAACTTAACGGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCCTTGAGAGAGGCTTTAAGACAAGGCATAGAAATTACAAATTTGAAGAAGGAGGATATGCGACCTGTAACTCTTCAGGACTTCGAGAATGCTCTCCATGAGGTGAGGCCTTCTGTCTCCCCAAATGAACTTGGCACTTATGATCAATGGAACAAGCAATTTGGAAGCCTATCACTGTAG 1944 0.4516 MEEAKEKNWRMEVEEKLKRLQSLLFGAERALENNDFSSAYVLALRLLGFLDAHCHSDVDEAFVQPIRRDALAKLHSARRSLTPQSDRQAFEQAKKSPGCIFGTTGDIDIEKIRNSKYFRALVDQLGKQDKAGIKASKQMVQTKLPSMYGKSSLRTSNSSKSFLNMKNNSSEDCMNLDRPQSHASHTNGRGVSSILQVEPEERAFGNTFSTKRVHMENTSPRVGYVKSLSSKEEVNPDVCGNGFVTARAKLEMEAKQRRGVGGSPSASVSPQCDNNPANRLYGGRSYGVSRRGIRGNFVPPIKSNGNNVGNMSTRIAAKNDDSLDDSTKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWNDIAGLEHAKKCVTEMVIYPLQRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSSEEMDMICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITNLKKEDMRPVTLQDFENALHEVRPSVSPNELGTYDQWNKQFGSLSL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3992g00001 647 MobiDBLite consensus disorder prediction 262 278 - -
Mupr3992g00001 647 ProSitePatterns AAA-protein family signature. 508 527 IPR003960 GO:0005524|GO:0016887
Mupr3992g00001 647 Gene3D - 537 623 - -
Mupr3992g00001 647 Gene3D - 365 639 IPR027417 -
Mupr3992g00001 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 642 IPR027417 -
Mupr3992g00001 647 MobiDBLite consensus disorder prediction 257 281 - -
Mupr3992g00001 647 Pfam ATPase family associated with various cellular activities (AAA) 406 536 IPR003959 GO:0005524|GO:0016887
Mupr3992g00001 647 PANTHER AAA DOMAIN-CONTAINING 196 644 - -
Mupr3992g00001 647 FunFam Fidgetin-like 1 365 547 - -
Mupr3992g00001 647 Pfam Vps4 C terminal oligomerisation domain 609 643 IPR015415 -
Mupr3992g00001 647 SMART AAA_5 402 538 IPR003593 GO:0016887
Mupr3992g00001 647 MobiDBLite consensus disorder prediction 149 191 - -
Mupr3992g00001 647 Coils Coil 10 30 - -
Mupr3992g00001 647 FunFam Fidgetin like 1 537 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3992g00001 Mupr-Chr3992 1374 7117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3992g00001 321 645 Calmodulin-binding Proteins AT3G56690 30.952 4.86e-41 159