Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3990g00004 ATGAAATTGAGTGATCTCATGAAGGCTACCAACAACTTCAGTAATACCAACATCATTGGGACAGGAAGAACAGGAACTGTTTACAGAGCTGTCCTTGATGACGGCACAATACTTATGGTTAAGAGATTACAGGAATCTCAGCGCACCGAGAAAGAATTTATGTCTGAGATGGGTACACTGGGGACTGTCAAACATCGCAACCTGGTTCCACTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTTGTGGTCTATAAAAACATGCCGAATGGCACCCTCCACGATCAACTCCATCCTGCTGATGGTGTTAGTACCCTTGACTGGACTACGAGGCTCAAAATTTCAATCGGAGCAGCCAAAGGGTTGGCCTGGCTTCATCATAGCTGCAATCCCCGAATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTAGGTTACGTTGCCCCTGAGTATACAAGAACTTTGGTTGCTACACCTAAAGGGGATATCTACAGTTTTGGAATTGTTCTTCTTGAGTTGGTGACAGGCGAAAGGCCTACCAATGTGGCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATCACTGAGCTCTCAAACAACTCGAAACTCAAGGATGCCATTGACGAATCGCTAGTTGACAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTTGTACCAGCTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGTTTTTAAGAGCTATTGGGGGTAGATACAATTTCTCAACTGAGGATGAGATATTGGTGCCTACTGATATTGGTACTACTGATAACATGGAGGAACTCATTGTAGCTCGAGAAGGAAATACAATAATATCTAGGTTCTACGGAAGATTGCCTTCTTCAGTTTCTCCTGTGAAAGTGCTTGAGTTTGTTCTGTGGAACTACTTTTGA 1059 0.4278 MKLSDLMKATNNFSNTNIIGTGRTGTVYRAVLDDGTILMVKRLQESQRTEKEFMSEMGTLGTVKHRNLVPLLGFCMAKKERLVVYKNMPNGTLHDQLHPADGVSTLDWTTRLKISIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGIVLLELVTGERPTNVAKAPETFKGNLVEWITELSNNSKLKDAIDESLVDKDVDSELFQFLKVACNCVVPAPKERPTMFEVYQFLRAIGGRYNFSTEDEILVPTDIGTTDNMEELIVAREGNTIISRFYGRLPSSVSPVKVLEFVLWNYF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3990g00004 352 ProSiteProfiles Protein kinase domain profile. 13 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3990g00004 352 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 88 307 - -
Mupr3990g00004 352 Pfam Protein kinase domain 15 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3990g00004 352 CDD STKc_IRAK 19 287 - -
Mupr3990g00004 352 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Mupr3990g00004 352 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Mupr3990g00004 352 Gene3D Transferase(Phosphotransferase) domain 1 88 303 - -
Mupr3990g00004 352 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3990g00004 Mupr-Chr3990 11173 13498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3990g00004 1 297 Receptor kinase-like Gene Family AT1G27190 54.698 5.26e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mupr3990g00004 Pkinase 9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3990g00004 - - gsj:114405114 589.726