Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3987g00004 ATGACAACTTACCAACTGAACAACGCCAAAGTCCACAAAACAACAAACGGTGGAGGATATTTATCTTCAGCTGTTTTTCATTGCATGAGGAGTTTTCATATGGAGATTTCATCAATTAGAGGGTTACCTGAACAGGGGATAATTGAGGATCCTAACTTTCTCCATCAGTGGCAGTTAAACTCTATTGATGCAACTAGCTTAACAGGTGCTGCTTTTGGAGAGATTTTACAAAAGCACTCATTCTCTGATAACACAAACTTCAACCACAAAACATCCATGGAAATGTCACCAAATGGAATTGAAAGACCTGCAAAACAGCTCAGAAACAACGGCTGGAATCACAACAAAAGTCAACAACAGACGTCAGAGACACAATTTGCTTCATGCTCAAATCTTCTTTCATTTGTTAATTCCAATTACACAAGTGAATTGGGACTAATGAAGCCTAAGGTGGAGATGGTGAGTCCTAAAATCAATAACAGCACTCTTGCAGACATGTTGATCTCTCAAGGAACCTTGGGGAATCAAAACTATCTCTTCAAGGCTAGCCATGAGGCCAAAAAGATTGAGACACGTCCTAAACTTTCTCAACCTCAAGACCACATAATAGCTGAAAGGAAGCGGCGAGAGAAGCTCAGCCAACGGTTCATTGCTCTATCTGCTCTTGTTCCGGGCCTAAAGAAGATGGACAAAGCTTCTGTTCTTGGAGAAGCTATCAAGTACTTGAAGCATATGCAAGAGAAAGTGAGTGCTCTTGAGGAGGAACGGAACAAGAAGAAAACTGTGGAATCTGTGGTGGTTGTGAAGAAATCTCAGCTATCTGATGATGCTGAAGACTCTTCTTCTTCAGGCACTGGTGGTACATTTGACGAGGCACTTCCTGAAATTGAAGCACGATTTTGTGAAAGAAATGTCCTCATAAGAGTACATTGTGAGAAGAATAAAGGAATCATAGAGAAAACAATTAGTGAAATTGAGAAACTCCATCTAAAAGTCATCAACAGTAGTGCCTTGACATTTGGGAGTTTCATCCTGGATATAACCATTATTGCTCAGATGGATATCGAATTTTGCATGACAGTGAAGGATCTTGTGAGAAGTTTACGCTCAGCTTTTTCATATTTGTTTCACAACGATGGAGTTGATGCAAGGATTCCAATGTTCGAATCAATTCAA 1176 0.4005 MTTYQLNNAKVHKTTNGGGYLSSAVFHCMRSFHMEISSIRGLPEQGIIEDPNFLHQWQLNSIDATSLTGAAFGEILQKHSFSDNTNFNHKTSMEMSPNGIERPAKQLRNNGWNHNKSQQQTSETQFASCSNLLSFVNSNYTSELGLMKPKVEMVSPKINNSTLADMLISQGTLGNQNYLFKASHEAKKIETRPKLSQPQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGEAIKYLKHMQEKVSALEEERNKKKTVESVVVVKKSQLSDDAEDSSSSGTGGTFDEALPEIEARFCERNVLIRVHCEKNKGIIEKTISEIEKLHLKVINSSALTFGSFILDITIIAQMDIEFCMTVKDLVRSLRSAFSYLFHNDGVDARIPMFESIQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3987g00004 392 PANTHER BHLH TRANSCRIPTION FACTOR 71 372 - -
Mupr3987g00004 392 MobiDBLite consensus disorder prediction 94 123 - -
Mupr3987g00004 392 Coils Coil 235 262 - -
Mupr3987g00004 392 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Mupr3987g00004 392 SMART finulus 202 251 IPR011598 GO:0046983
Mupr3987g00004 392 MobiDBLite consensus disorder prediction 108 123 - -
Mupr3987g00004 392 Pfam Helix-loop-helix DNA-binding domain 199 246 IPR011598 GO:0046983
Mupr3987g00004 392 Gene3D - 195 268 IPR036638 GO:0046983
Mupr3987g00004 392 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 259 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3987g00004 Mupr-Chr3987 32918 37117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3987g00004 34 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.787 2.14e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr3987g00004 HLH 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3987g00004 - - gmx:100798018 608.986