Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3982g00004 ATGGCTTTTGAGCCATTGGTTTGGTATTGTCGGCCAGTTGCAAATGGTGTATGGACAAAAGTAGTGGCGAATGCCTTTGGTGTTTACACTCCCTGTGCGATTGACTCTCTAGTGATCTCCATATCTCATTTAGTACTTCTAGGCCTGTGCGTTTACCGCATATGGTTGATCAAGAAGGATTTCAAAGCCAAGAGGTTCTGTTTAAGGTCAAATCTTTACAATTATATTCTGGGATTGTTAGCTTTATATTGTGTGGCAGAGCCATTATACAGATTGATCATGGGAATATCAGTTCTAAATTTAGATGGGCAGGCTCAACTTGCTCCATTTGAGATAATTTCACTGATCATTGAGACTCTTGCATGGTGTTCTATGCTGATTTTGATTGGGCTTGAAACAAAAGTCTACATCTGGGAATTCCGATGGTTTGTCAGATTTGGTTTGGTTTATGCTATTGTAGGGGATGCTGTAATGTTCAATCTCATCATTTCTGTGAAGGAGTTCTATAGCAGCTCTGTGCTGTATTTGTACATCAGTGAGGTGGTTGGTCAGGTTTTGTTTGGAATACTTTTGCTTGTGTATGTTCCTACTTTGGATCCTCATCCAGGTTATACCCCCATTGCGAGTGAGATGATTACTGATGCTGCATATGATGAACTCCCCGGAGGAGATATGATATGTCCTGAGAGGGGTGCCAACATATTGTCAAGAATAATGTTTTCTTGGATGAATCCCATCATGAAACTAGGATATGAAAGGCCACTGACAGAGAAAGACATATGGAAATTAGATACTTGGGATCAGACAGAGACACTGAACAATAAGTTCCAGAAATGTTGGGCTGAGGAGTCTCGGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGCAAGATTGGCAATGATATTTCCCAATTTTTGGGTCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAAATGGGGATCCAGCCCGGAAAGGCTATGTTTATGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTACCGGATAAGATCAACATTGGTGGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCATGAAGCGCGAAAGCAATTTGCCACTGGAAAAATAACCAACTTGATGACAACTGATTCTGAGGCACTTCAGCAAATATGCCAGTCACTTCATACTTTGTGGTCGGCTCCATTTCGAATTGTTGTTGCTTTGGTTCTTCTTTACCAACAACTTGGTGTTGCTTCCCTTCTTGGTGCTCTGATGCTAGTTCTTATGTTTCCGTTACAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAAAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAATTTCCAGTCTAAAGTACAGATTGTCCGAAATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTGTAATGGATTTATACTAAATAGCATTCCAGTTTTTGTAACTGTGATTACATTTGGAGTATTCACCTTGCTTGGAGGGGATCTGACACCTGCAAGAGCTTTTACATCACTTTCTCTGTTTTCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATACAATAACTCAGGTGGTTAATGCAAATGTATCATTGAAGCGACTAGAAGATTTACTCTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCTCTTGAGCCAAGTTTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCAAAGGCAGAGAGGGCCACATTGTCAAACATAAATCTGGATATACCTGTTGGTTGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTGGTATCTGCAATGCTTGGAGAACTTCCTCCAGTGGCAGATTCAACTGTTGTTATGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCATGGATTTTTAATGCAACTGTACGGGATAATGTTTTGTTTGGCTCTGTCTTTGACCCAATAAGATATCAAAGGGCAATAAATGTGACTGAGCTGCAGCATGACCTTGAGTTACTGCCTGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGCGGTGGCCAGAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTGCATCTTTGATGACCCTTTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTACCTTCATGCCAACTGACTCCACTATAGAGAGACCTATTCAAATCCCTGATATACTTGGCCTGTGA 2382 0.4139 MAFEPLVWYCRPVANGVWTKVVANAFGVYTPCAIDSLVISISHLVLLGLCVYRIWLIKKDFKAKRFCLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQAQLAPFEIISLIIETLAWCSMLILIGLETKVYIWEFRWFVRFGLVYAIVGDAVMFNLIISVKEFYSSSVLYLYISEVVGQVLFGILLLVYVPTLDPHPGYTPIASEMITDAAYDELPGGDMICPERGANILSRIMFSWMNPIMKLGYERPLTEKDIWKLDTWDQTETLNNKFQKCWAEESRKSKPWLLRALNASLGGRFWWGGFCKIGNDISQFLGPLILNQLLQSMQNGDPARKGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGYRIRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDSEALQQICQSLHTLWSAPFRIVVALVLLYQQLGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVNFQSKVQIVRNDELSWFRKASLLGACNGFILNSIPVFVTVITFGVFTLLGGDLTPARAFTSLSLFSVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERILLPNPPLEPSLPAISIKNGYFSWDAKAERATLSNINLDIPVGCLVAVVGSTGEGKTSLVSAMLGELPPVADSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSVFDPIRYQRAINVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVCIFDDPLSALDAHVARQVTFMPTDSTIERPIQIPDILGL 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3982g00004 793 CDD ABCC_MRP_domain1 608 772 - -
Mupr3982g00004 793 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 793 IPR003439 GO:0005524
Mupr3982g00004 793 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 773 - -
Mupr3982g00004 793 FunFam ABC transporter C family member 2 279 593 - -
Mupr3982g00004 793 Pfam ABC transporter 626 761 IPR003439 GO:0005524
Mupr3982g00004 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 772 IPR027417 -
Mupr3982g00004 793 SUPERFAMILY ABC transporter transmembrane region 289 588 IPR036640 GO:0005524|GO:0016020
Mupr3982g00004 793 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Mupr3982g00004 793 Gene3D ABC transporter type 1, transmembrane domain 271 594 IPR036640 GO:0005524|GO:0016020
Mupr3982g00004 793 CDD ABC_6TM_ABCC_D1 305 584 IPR044746 GO:0140359
Mupr3982g00004 793 Gene3D - 602 776 IPR027417 -
Mupr3982g00004 793 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3982g00004 793 Pfam ABC transporter transmembrane region 306 564 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3982g00004 Mupr-Chr3982 5921 21625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3982g00004 608 772 Calmodulin-binding Proteins AT2G36910 30.337 1.35e-19 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3982g00004 - - gmx:100801762 1423.68