Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3980g00005 ATGGCAATTGGGCTCATGGAGGTGCAGCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGACATCTTTGCTCATATGGATCCGTATGTTGTGTTACAATACAAAGGTCAAGAGCGCAAGAGCCGTGTAATTCATGAGGGAGGCAGGAATCCCGTATGGAATGAGAAAATTGTATTCAGAGTGGAATACCCTGGATCAGGTGACCAATACAAGCTCAACCTTAAAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCTACAATCTATGTAAAGGATTTATTGGCAGAAGGAGCAGAGAATGGATCGGCTGTGCTTCGTCCTCACAAGTATAGTGTGGTTCGAGCTGACCTATCTTATTGTGGTGAAATTGAAGTTGGTATAACTTTCACTCGAAAGGAAGAGGATTATACTGACGATGATGTTGGAGGATGGAAGGAAATCGACAGAACTTAA 465 0.4301 MAIGLMEVQLVKAKGLQETDIFAHMDPYVVLQYKGQERKSRVIHEGGRNPVWNEKIVFRVEYPGSGDQYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAVLRPHKYSVVRADLSYCGEIEVGITFTRKEEDYTDDDVGGWKEIDRT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3980g00005 154 PANTHER C2 DOMAIN-CONTAINING 3 137 - -
Mupr3980g00005 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Mupr3980g00005 154 SMART C2_3c 5 106 IPR000008 -
Mupr3980g00005 154 Pfam C2 domain 5 104 IPR000008 -
Mupr3980g00005 154 Gene3D C2 domain 2 135 IPR035892 -
Mupr3980g00005 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3980g00005 Mupr-Chr3980 34336 37123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3980g00005 3 105 C2H2 Transcription Factor Family AT4G21160 33.010 2.12e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3980g00005 - - gmx:100500493 289.271