Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3980g00002 ATGGGGTGCTGCTTCAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCAATGGTTTGAGTTCAAAGGATGGTAACAGAGAAGAAAATGGCTTAAGCAGCAACAACTCCGTTGCCTCCATGCCCCCAACTCCGAGGACGGAGGGTGAGATCTTGAAGTCCTCAAATATGAAGAGCTTCACCTTCAGTGAGCTAAAAACTGCCACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGGTTTGGTTGTGTCTTTAAGGGGTGGATTGATGAGCAGTCACTTGCACCAGTTAAGCCAGGGACTGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAGGTCTTCAGGGACATAGTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTGCATCATCCTAATCTTGTGAAACTGATTGGTTATTGCTTAGAGGATGATCAACGTCTCTTGGTGTACGAGTTTTTGACCAAGGGAAGTTTGGACAATCATTTATTTAGGAGAGCTTCTTACTTTCAACCACTTTCTTGGAACATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCGTATCTTCATAGCGATGAAGCAAAAGTGATATATCGAGACTTCAAAGCTTCAAATATCTTACTTGGTTCGAATTACAATGCAAAGCTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGCAGGTGATAAGAGCCATGTCTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATGGCCACAGGTCACTTGACAAAGAAGAGTGATGTATACAGTTTTGGGGTTGTTATGCTGGAAATAATGTCTGGGAAACGTGCACTTGACAACAACAGGCCAAGTGGGGAGCAGAATTTAATAGAATGGGCGAAACCCTACCTGAGCAGCAAACGCAGGGTGTTCCAAGTCATGGATGCTCGCATTGAAGGCCAATACACGTTGCGTGAGGCCATGAAAGTGGCCAACCTTGCCATTCGATGCCTCTCTGTGGAACCAAGATTTAGACCAAAAATGGATGAGGTCGTTACAGCATTAGAGGAACTTCAGGATTCTGATGACAAAGCTGGATCTGTGGGAAGCTCCAAAGATCAAACTGTCAAAAGGAGTCTTCACAGCTCAACCACCACTGGCCCTAGACAACATTCAGTTAAACAACACACAAGTCAAACAAACTAA 1200 0.455 MGCCFSARIKAESPPRNGLSSKDGNREENGLSSNNSVASMPPTPRTEGEILKSSNMKSFTFSELKTATRNFRPDSVVGEGGFGCVFKGWIDEQSLAPVKPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDQRLLVYEFLTKGSLDNHLFRRASYFQPLSWNIRMKVALDAAKGLAYLHSDEAKVIYRDFKASNILLGSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVMLEIMSGKRALDNNRPSGEQNLIEWAKPYLSSKRRVFQVMDARIEGQYTLREAMKVANLAIRCLSVEPRFRPKMDEVVTALEELQDSDDKAGSVGSSKDQTVKRSLHSSTTTGPRQHSVKQHTSQTN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3980g00002 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Mupr3980g00002 399 SUPERFAMILY Protein kinase-like (PK-like) 37 352 IPR011009 -
Mupr3980g00002 399 MobiDBLite consensus disorder prediction 18 52 - -
Mupr3980g00002 399 FunFam Probable serine/threonine-protein kinase PBL8 157 373 - -
Mupr3980g00002 399 Gene3D Transferase(Phosphotransferase) domain 1 157 380 - -
Mupr3980g00002 399 MobiDBLite consensus disorder prediction 366 399 - -
Mupr3980g00002 399 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Mupr3980g00002 399 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Mupr3980g00002 399 MobiDBLite consensus disorder prediction 356 399 - -
Mupr3980g00002 399 FunFam Serine/threonine-protein kinase BIK1 38 156 - -
Mupr3980g00002 399 CDD STKc_IRAK 77 356 - -
Mupr3980g00002 399 PANTHER OS01G0588500 PROTEIN-RELATED 37 357 - -
Mupr3980g00002 399 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3980g00002 399 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Mupr3980g00002 399 MobiDBLite consensus disorder prediction 10 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3980g00002 Mupr-Chr3980 14934 18831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3980g00002 1 393 Glycoside Hydrolase AT3G07070 44.390 1.14e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr3980g00002 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3980g00002 - - gmx:100775335 731.095