Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3951g00008 ATGTCTTCCTCGTCGACGCACCACACTTACAGTCGAAAGCAAAAGTCTCTCGGTCTCCTCTGCACTAATTTCTTGAGTCTATACAACAAAGAAGGCACGCGCTTAATCGGTCTCGATGACGCCGCTTCACGATTGGGAGTCGAAAGAAGACGGATCTATGATATCGTCAACGTCTTGGAGAGCGTCGGGGTGCTTGCGAGAAAAGCTAAAAATCAGTATACATGGAAAGGGTTTTCTGCAATTCCTGCGGCTCTGCAAGAACTCAAGGATGAGAGTTTGAAGGAGAACCCTGGATCTTTTGACGACTCCATTGACAGTACCAAAGTGTCTGATGATGAGGACGAGGAAGAAACATTTCCCAATCCCAGTACTGAAAGTCAGGGTGACAAGGCAAATCCTGATTCCTGCGCTCCTGTCAAATGTTCGAAGAATGAAAACAGAAGGGAAAAATCTCTGGCACTGCTTACTCAGAATTTTGTCAAGCTTTTTGTCTGCTCTAACGTGAGTGTCGCCAATTTATCGGATGATTCTTTGACATTCCAAATTGATAACATTGAAATGATCTCCCTTGACGAAGCTGCTAAGTTATTGCTTGGAAATGCCCACAATACATCAATAATGAGAACAAAAGTCAGACGCCTATATGATATTGCAAACGTGTTATCCTCCATGAACCTAATCGAGAAGACCCATACAACAAACACTAGAAAACCAGCATTCAGGTGGCTGGGTTGGAGAGGGAAAATATGGAGTGAATCAGTTGACTTAGCTCACAATTCAAATATCAATGAGTTAGGAAAAAGGATGTTTGGAGCTGACATCACAAACATAAGTTTTAAAAGGAACAAAGTTGATTTGCTCATGGATGGGCAGAACTCTAAATTGCAAAACCAACAGGAAAGTATTAGTTACAGAGCTCAGCCAGAGAAAAGCAACTCAATAAAAGATGCAAAACAGACTTCAAAGAGCTATCAGTTTGGCCCTTTCGCTCCAGCTTATGTGCCCAAAGTTGGAGCCTCTGAAAATAATAGTGTGAAACAGGTGCAAGACTGGGACAACCTCGCACAGGTGCATCGTCCTCAGTATCAAAACCAAGCTTTGAAAGAGCTATTCTCTCACTACATGGAAGCATGGGAATCTTGGTACTCAGAAGTTGCTGGGAAGAGGTCAACAAAAACTTTGTAA 1185 0.427 MSSSSTHHTYSRKQKSLGLLCTNFLSLYNKEGTRLIGLDDAASRLGVERRRIYDIVNVLESVGVLARKAKNQYTWKGFSAIPAALQELKDESLKENPGSFDDSIDSTKVSDDEDEEETFPNPSTESQGDKANPDSCAPVKCSKNENRREKSLALLTQNFVKLFVCSNVSVANLSDDSLTFQIDNIEMISLDEAAKLLLGNAHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTTNTRKPAFRWLGWRGKIWSESVDLAHNSNINELGKRMFGADITNISFKRNKVDLLMDGQNSKLQNQQESISYRAQPEKSNSIKDAKQTSKSYQFGPFAPAYVPKVGASENNSVKQVQDWDNLAQVHRPQYQNQALKELFSHYMEAWESWYSEVAGKRSTKTL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3951g00008 394 MobiDBLite consensus disorder prediction 301 320 - -
Mupr3951g00008 394 Gene3D - 141 245 IPR036388 -
Mupr3951g00008 394 Gene3D - 7 79 IPR036388 -
Mupr3951g00008 394 FunFam E2F transcription factor-like E2FE 177 246 - -
Mupr3951g00008 394 SUPERFAMILY "Winged helix" DNA-binding domain 150 245 IPR036390 -
Mupr3951g00008 394 PANTHER TRANSCRIPTION FACTOR E2F 5 363 IPR015633 GO:0000978|GO:0006357
Mupr3951g00008 394 SMART E2F_TDP_2 12 77 IPR003316 GO:0005667|GO:0006355
Mupr3951g00008 394 SMART E2F_TDP_2 147 244 IPR003316 GO:0005667|GO:0006355
Mupr3951g00008 394 MobiDBLite consensus disorder prediction 94 142 - -
Mupr3951g00008 394 Pfam E2F/DP family winged-helix DNA-binding domain 13 77 IPR003316 GO:0005667|GO:0006355
Mupr3951g00008 394 Pfam E2F/DP family winged-helix DNA-binding domain 149 244 IPR003316 GO:0005667|GO:0006355
Mupr3951g00008 394 SUPERFAMILY "Winged helix" DNA-binding domain 11 75 IPR036390 -
Mupr3951g00008 394 FunFam E2F transcription factor 8 7 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3951g00008 Mupr-Chr3951 46343 52427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3951g00008 7 385 E2F-DP Transcription Factor Family AT3G48160 54.922 1.60e-128 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mupr3951g00008 E2F_TDP 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3951g00008 K09391 - gmx:100818090 556.214