Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3951g00003 ATGGTAATCCCAGTACCCAGTAGACAGCTATTCATAGATGGCGAGTGGAAAGTCCCCGTTTTCAACAACCGAATTCCGATCATCAACCCCGCCACTGAAGGCACAATAGGGTATATTCCAGCTGCTACTAAGGAAGATGTTGACCTTGCCGTGGATGCTGCTAAAAAAGCCTTGTCCCGGAACAAAGGCAGAGATTGGTCTTCAGCTTCTGCCTCTCTTCGTGCTCGCTATCTTCGAGCCATCGCTTTAAAGATAACGGAGAAAAAGGATGAGCTAGGAAAGCTCGAAGCAATTGATTGTGGAAAACCACTAGATGAAGCACTGGCAGACCTGGATGATGTTGTTGGTTGTTTTAACTACTATGCTGAGCTGGCCGAAGGGTTGGATGCAAAGCAAAAGGCTCCTGTTTCCCTTCCTATGGAAACCTTCAAGAGCTACGTTCTCAAGGAGCCCATTGGGGTTGTTGCATTAATTACTCCATGGTATCTGCTGAATTATCCTCTCTTAATGGCTACATGGAAAGTTGCTCCTGCTCTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGTTTGGAGCTGGCTGAAATATGCAGAGAAGTGGGCCTTCCTCCAGGGGTATTAAATATTGTCACTGGATTAGGCCATGAAGCTGGTGCTGCTTTGGCATCTCATCCTGATGTAGACAAGATTTCCTTTACTGGAAGCTCTGTAACTGGAAGCAAGATTATGACAGCTGCAGCACAGCTAATCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGACTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATATGCAGTGCAACATCTCGCCTTCTTGTGCATGAAAGTATAGCAACAGAATTTGTTAATAGGCTTGTGAAATGGGCCAAAAACATCAAGATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTGTTGTTAGTGAAGGACAGTATAAAAAAGTGTTGAATTTTATCTCAACTGCTAAGAGTGAGGGTGCAACAATTTTGACCGGAGGGTCTCGCCCAGAGCATTTGAAAAAGGGATACTTTGTTGAACCAACCATCATAACTGATGTGACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTCCGTGAAAACATTCAGTACTGAGGAAGAAGCTATTGAACTAGCAAATGACACACACTACGGCTTAGGGTCTGCTGTAATGTCAAAAGATCTAGAAAGATGCGAGCGCATATCTAAGGCTATTCAGGCTGGAATTGTATGGATAAATTGTGCTCAACCAAGCTTCATTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGACTCGAGAACTATTTAAGTGTGAAGCAAGTGACCAAGTACATATCTGATGAACAGTGGGGCTGGTATCAGCCTCCTTCAAAGCTGTGA 1521 0.4451 MVIPVPSRQLFIDGEWKVPVFNNRIPIINPATEGTIGYIPAATKEDVDLAVDAAKKALSRNKGRDWSSASASLRARYLRAIALKITEKKDELGKLEAIDCGKPLDEALADLDDVVGCFNYYAELAEGLDAKQKAPVSLPMETFKSYVLKEPIGVVALITPWYLLNYPLLMATWKVAPALAAGCTAILKPSELASVTCLELAEICREVGLPPGVLNIVTGLGHEAGAALASHPDVDKISFTGSSVTGSKIMTAAAQLIKPVSLELGGKSPIIVFEDVDLDKTAEWTIFGCFFTNGQICSATSRLLVHESIATEFVNRLVKWAKNIKISDPLEEGCRLGPVVSEGQYKKVLNFISTAKSEGATILTGGSRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLSVKTFSTEEEAIELANDTHYGLGSAVMSKDLERCERISKAIQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEQWGWYQPPSKL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3951g00003 506 FunFam Betaine aldehyde dehydrogenase 266 457 - -
Mupr3951g00003 506 SUPERFAMILY ALDH-like 5 494 IPR016161 GO:0016491
Mupr3951g00003 506 Pfam Aldehyde dehydrogenase family 23 488 IPR015590 GO:0016491
Mupr3951g00003 506 CDD ALDH_F10_BADH 27 490 - -
Mupr3951g00003 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 270 461 IPR016163 GO:0016620
Mupr3951g00003 506 PANTHER ALDEHYDE DEHYDROGENASE 5 505 - -
Mupr3951g00003 506 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Mupr3951g00003 506 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 280 - -
Mupr3951g00003 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 486 IPR016162 GO:0016491
Mupr3951g00003 506 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 290 301 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3951g00003 Mupr-Chr3951 6038 12248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3951g00003 1 504 Aldehyde Dehydrogenase Gene Family AT1G74920 77.579 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3951g00003 K00130 - gmx:100170755 919.072