Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3933g00006 ATGGAAGGGATAGATCCCAATTCATGCACAAGGTCAGTGTTAGAGAAGAAAGCAAGACCACAAGAGCAATTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAACCCAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGGTCTCTCAGAAACGTGCCCGTTGGAGGTGGCTCCAGGAAGAACAAGAAGGTCACTTCATCTGTATCACCATCATTTTCAAAGGTTCCTGACTTGAATCCACCAAGCCTCTCTTCAGCCCAAAACCCTAAAATGCAAGGAGTTCATGACCTTAATTTGGCCTTTCCTGCAGCCATGGACAATTATCATGGCATGTCTCCATATGTTGAGATGCCAAAACTTGAAATTGGTGACGGTACTAGTCACCACCATAGCCCTTCTTCTGCTCCAACTTCTCTTTCAGCAGTTGAGCTACTACGGTCTGGCATGGCTTCTACGGGTTTGAATCCTTATGTTCCTAATTCCTTGATGTTAGCCTCAGATTCACTCTACCAACCTGCCTATCCCATGCAGGAAATTAAACCAAACCTTAGCTTTTCGGTTGATGGGTTTGGAAATAGACCATATGGAGCTCAAGAGAATAGTGGTGGGAGGCTTTTGTTCCCTTTTGGAGACATCAAGCACCTTTCTGCAGATTCTTCCAACTATGCAAGCACTAGGTGA 726 0.4463 MEGIDPNSCTRSVLEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTSSVSPSFSKVPDLNPPSLSSAQNPKMQGVHDLNLAFPAAMDNYHGMSPYVEMPKLEIGDGTSHHHSPSSAPTSLSAVELLRSGMASTGLNPYVPNSLMLASDSLYQPAYPMQEIKPNLSFSVDGFGNRPYGAQENSGGRLLFPFGDIKHLSADSSNYASTR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3933g00006 241 MobiDBLite consensus disorder prediction 65 105 - -
Mupr3933g00006 241 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Mupr3933g00006 241 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Mupr3933g00006 241 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Mupr3933g00006 241 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 138 IPR045174 GO:0003700|GO:0006355
Mupr3933g00006 241 MobiDBLite consensus disorder prediction 75 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3933g00006 Mupr-Chr3933 70271 71795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3933g00006 16 232 C2C2-Dof Transcription Factor Family AT3G61850 53.782 8.05e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr3933g00006 zf-Dof 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3933g00006 - - gmx:778111 374.015