Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3926g00001 ATGGTTTCTCTCACGGGAAAATCTAGAGTGGGCTCAACTCGAGCCTCTGTTGGTGGTGCCCAATCTCGCCCAAGTGGACGTCTGCAAGAGGAGAAGGAACAACTTCAAGACCCTCATGGTATTCAAATTAAATGGGCTTGTCCCAAGGATGTATCTATTACGAAAAGGAGTGCTGTGGTAGCCAACAAAGGGGTTATTCTGAATAGTACCAGAAATCCAAAGGGTGGGTCTCAAAAAAATATGGATAAAAGTAGTGGCAAATATGGTACTTCTGTAGCAAATACAAATGTGAGAAAGGCATTGGCTGATGTTAGCAATGCTCAAGAAAACTTCACAACAGCTGTTGGGCATGCTAGCTCAAAAATGAAGGTTTCAGCAGGTTTAAGCACCAAAATAGTGGGTGTATCTTTGAGGAAATCCTTCACGGGAAGGGTGCAAAGAAATACAAGTAAAGGGGATGTTCAGTTAGATGCTCTCAATAGAGATGATCAGAAGAATAATACAAATGGAGGCCAATCAGTTATTGCCACAAAGGACAGGTTTACAAGGAAGCCTATATTACGGTTACCTACAGCTACAAGAATATTCATTTGTCTCTCCCAAGCACTTCAAGGAAGTCTTTACCAGTACCAAGGAGGGAAAATGTTAGAAGTTTTCAAACAGCAAAAGGCCAAAGTGGTTTTCCCAGTAAGAAGCTGCGACATAGATAAGCACTTTGCAAATGTCAATGAACTGACCTATGCTATGTTAATTAAACTTAATATACTATTGATTTCAGCTAAGGCAACAACAAACAGAAGAGATAGTTCCCAACTGATTAATGCAAGAAGCTATCCATGGAAGAATCGAGTGAGTGATGGTTTTGTTCAAATGGTTCAACCTAATGTTTTTCATGCATCCTCAAGGAAGTCCACCAAGCCTATTGTTAAAACCACACTGAGGGTTTCCACTGCTCAAAGGACTTTAAAATCTAATTCCATATCAGCTCAGAACAAATTAGAATCAACTACTGTAACATCGTCTCAGGACAAGGAAACGGTTTCTTTGTCTCTTCCTGATAATGGTTTGGCTGTTTCTGATGATGCAAATCAAAGTCATCTTCCATCTGGAGAGAGCAATCTGAAAACAGATTTGGCAGAGCTTATTCCAAAGAAAAATTCCAGCCGCCGGAAATCGTATACTACTTCATTAATTGAAAGATCTAAGTTTCTCAAGGAAAATGGTGAAGTTAAAGAGCAGAATAACATACCAAATATAGATAATGAATGCAATCAACTTGAAGTTTCTGAATACATTGATGAGATATATCACTACTATTGGTTTACTGAGGCACAAAATCCAGTTCTAGCAAATTACATGTCAATTCAGGCAGACATTACACCTCATTTGCGGGGCATTTTGATCAACTGGCTGATTGAAGTACACTTCAAGTATGATTTGATGCCAGAAACACTATATCTCACTGTTACATTGTTGGATCAATATCTTTCCCTAGTGACTATCAAAAAGACTGATATGCAGTTGGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGACTTTTGGCATCCTAGGGTCAAAGATTTAATAAGCCTCTCAGCTGAGTCATATACTAGAGATCAAATGCTTGAAATGGAAAAGCTAATTCTTAGAAAATTAAAGTTCCGTCTTAATTCTCCTACTCCTTATGTTTTCATGGTGAGGTTTCTCAAGGCTGCACAATCAGATAAAAAGCTTGAACACATGGCATTCTTTCTGGTTGACCTATGCTTAGTTGAATATGAAGCTTTAGCATTCAAGCCTTCATTACTTTGTGCATCAGCCCTCTATGTTGCACGTTGTACTTTGCAAATAACTCCACCATGGACCCCACTACTTCACAGGCATGCGCGTTATGAATTCCACAAAGCTGCTGGAGTTGGAAAATTGAAGGTTACATATGAAAAATACTCTACACAGGAATTCGGTAGGGTTGCAGCATTGAAACCGTTGGATAAACTTCCCCTGTGA 2016 0.3929 MVSLTGKSRVGSTRASVGGAQSRPSGRLQEEKEQLQDPHGIQIKWACPKDVSITKRSAVVANKGVILNSTRNPKGGSQKNMDKSSGKYGTSVANTNVRKALADVSNAQENFTTAVGHASSKMKVSAGLSTKIVGVSLRKSFTGRVQRNTSKGDVQLDALNRDDQKNNTNGGQSVIATKDRFTRKPILRLPTATRIFICLSQALQGSLYQYQGGKMLEVFKQQKAKVVFPVRSCDIDKHFANVNELTYAMLIKLNILLISAKATTNRRDSSQLINARSYPWKNRVSDGFVQMVQPNVFHASSRKSTKPIVKTTLRVSTAQRTLKSNSISAQNKLESTTVTSSQDKETVSLSLPDNGLAVSDDANQSHLPSGESNLKTDLAELIPKKNSSRRKSYTTSLIERSKFLKENGEVKEQNNIPNIDNECNQLEVSEYIDEIYHYYWFTEAQNPVLANYMSIQADITPHLRGILINWLIEVHFKYDLMPETLYLTVTLLDQYLSLVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISLSAESYTRDQMLEMEKLILRKLKFRLNSPTPYVFMVRFLKAAQSDKKLEHMAFFLVDLCLVEYEALAFKPSLLCASALYVARCTLQITPPWTPLLHRHARYEFHKAAGVGKLKVTYEKYSTQEFGRVAALKPLDKLPL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3926g00001 671 SUPERFAMILY Cyclin-like 424 560 IPR036915 -
Mupr3926g00001 671 CDD CYCLIN_CCNB1-like_rpt1 428 557 - -
Mupr3926g00001 671 MobiDBLite consensus disorder prediction 1 39 - -
Mupr3926g00001 671 Pfam Cyclin, C-terminal domain 562 639 IPR004367 -
Mupr3926g00001 671 SUPERFAMILY Cyclin-like 562 668 IPR036915 -
Mupr3926g00001 671 FunFam Cyclin N-terminal domain containing 2 449 560 - -
Mupr3926g00001 671 MobiDBLite consensus disorder prediction 326 373 - -
Mupr3926g00001 671 Pfam Cyclin, N-terminal domain 434 560 IPR006671 -
Mupr3926g00001 671 Gene3D - 449 554 - -
Mupr3926g00001 671 SMART Cyclin_C_2 562 666 IPR004367 -
Mupr3926g00001 671 Gene3D - 555 670 - -
Mupr3926g00001 671 MobiDBLite consensus disorder prediction 326 372 - -
Mupr3926g00001 671 MobiDBLite consensus disorder prediction 68 89 - -
Mupr3926g00001 671 MobiDBLite consensus disorder prediction 1 23 - -
Mupr3926g00001 671 PANTHER CYCLINS 389 653 IPR039361 -
Mupr3926g00001 671 SMART cyclin_7 469 553 IPR013763 -
Mupr3926g00001 671 SMART cyclin_7 566 650 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3926g00001 Mupr-Chr3926 5272 14640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3926g00001 271 671 Core Cell Cycle Gene Families AT1G16330 53.571 2.76e-145 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3926g00001 K21777 - gmx:100808850 885.174