Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3921g00001 ATGGAATCATCACATGGTTTGGAACCTTGTCCCTCTGAAGCCTCAAGCATCTCTGCTACCTCCGAAGGCATTTCCCATAAACCTTGTAATGAAGAAGAGAAAAATGACGAGGTGACAATAACAAAGGAGAAGGGTGTCAAATCTGAACAAGATCAAGCTTCCAATTCCACTTCTCACATGGTGTTGGATTTTGTTAAACTCACCAAGGATGAATCAATTCGTGCGTCCAAAGTGGAATTAGATTTTTTCAATCCAACTGGGGGTTCATCTTCTTCTAGGGCTAATAACATTGAAGGGAGAGATGAGAATAACAACGAGGAGAAATCATCAGAGACTAAGACTTTTTCTTGCAACTTTTGCAAGAAAGAATTTTCTTCTTCACAAGCCTTGGGAGGGCACCAAAATGCCCACAAGCAAGAGCGTGCCCTTGCAAAGCGTCGACAAGGGGCTGATGCTGGTACTTTTGGACACCCTCATTTTCTTTATTACCCTTATCCCTCACACTCCTTTTATGGATCCTATAACAGACCACTTGGAGTTCGAATGGAGTCTATGATTCACAAACCACCCTATCCTTCATCCCCACTTGGTTTTAGGTTTGGTCAAGGATGGTCAAGACAAGATATGCTAAACCCTTCTCTTGATCGATTGAGAATGGAGGGTTTGCATGGAAATAGTGGAATTAGGATTACGGGGAGTGATACAACTTCGAGGACACAAGATAATCTTGTTGGACACATTCCCTTCCTTGGAGAATCTTCTACAAATGTTTCTACCAAATCAAACTCAGCCCCATTGAGTACCACGGCTGGTGGTGATCATTCCAAACAAGAAGGAACCTCTAGTCCTGATTCTTCTGATGAGATTGATTTATCACTTAAGCTTTGA 888 0.4223 MESSHGLEPCPSEASSISATSEGISHKPCNEEEKNDEVTITKEKGVKSEQDQASNSTSHMVLDFVKLTKDESIRASKVELDFFNPTGGSSSSRANNIEGRDENNNEEKSSETKTFSCNFCKKEFSSSQALGGHQNAHKQERALAKRRQGADAGTFGHPHFLYYPYPSHSFYGSYNRPLGVRMESMIHKPPYPSSPLGFRFGQGWSRQDMLNPSLDRLRMEGLHGNSGIRITGSDTTSRTQDNLVGHIPFLGESSTNVSTKSNSAPLSTTAGGDHSKQEGTSSPDSSDEIDLSLKL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 248 295 - -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 81 112 - -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 83 98 - -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 9 25 - -
Mupr3921g00001 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 142 IPR013087 -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 248 288 - -
Mupr3921g00001 295 SUPERFAMILY beta-beta-alpha zinc fingers 112 142 IPR036236 -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 26 49 - -
Mupr3921g00001 295 Pfam C2H2-type zinc finger 115 139 - -
Mupr3921g00001 295 Gene3D Classic Zinc Finger 91 154 - -
Mupr3921g00001 295 ProSitePatterns Zinc finger C2H2 type domain signature. 117 137 IPR013087 -
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 128 150 - -
Mupr3921g00001 295 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 295 IPR044246 GO:0009788
Mupr3921g00001 295 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3921g00001 Mupr-Chr3921 1851 2738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3921g00001 105 249 C2H2 Transcription Factor Family AT5G10970 44.444 7.48e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr3921g00001 zf-C2H2_6 1.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3921g00001 - - gmx:102663393 460.685