Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3920g00001 ATGTCTTCTTCCAACAGACACTGGCCAAGCATGTTCAAATCCAAGCCCTGCAATCCCCACAACCAATGGCAGCATGACATCAACTCCTCTCTCGTGTCCACCGGATGCCAAAGAAGCCCTTATAATTCAGCCGCAGGAGGGGAAGAGAGAAGTCCAGAACCAAAACCAAGATGGAACCCAAAACCCGAACAAATTCGCATTCTGGAAACCATCTTCAACTCTGGGATGGTGAATCCCCCAAGGGAAGAGATAAGGAAGATAAGGGTGCAGTTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGAAGCAAGCACAAGCTCCGCCACCTCCAAAACTCAAAGAACCATAACTCAGCTGCATCTCTCACTCAGATTACACCACCTTCGTCCTCTTCCTCTTCGTCTGATAAATCCTCTTCCAAAGAATTAGTACACCCCAATGGATTCTCCTTTGGCTTCTCAAACATCAATGATGCAGTGCCTAATTCTCCTACTGCTTCTGTGAATCAGAATTATTTTCACCCTCACAACCACAATGACACAAACTTGTTACCACCAGCAGCTGAGCCTTTTTCCTTCCCCATGCAAAATAATGGGCAAGGTGCAGTAACTACTAATGCTATGACAACAACTCTTGGGTTTTGCTTCTCTGACTTCTCCAACAATATGATGCAATCTCAACCTCAGTGCCAACAAAATGCTGGACCTTGCACTAGTCTCATGATTAATGAAATAATGAACCATGGAACCTCCTCAAAGAGAGACCAGGATCCCGACAAGGCCATGAAGATACCACACCATCACCCACAACACCCACAACACCCACAACTTAATTTCTCTCTCACTTCAACCCCAGCTACAACTGTTATTCCTCCCATCACCAACACACCCATTTCGGTTCCATGTCCCATCACTCAACTTCAAGGTGTGTGTGAGACTGCATCAGGTGGTGCAAAATATACCGTGTTCATTAACGACGTTCCTTTCGAGGTTGCGGTGGGGCCCATCAACGTCCGTCAAGTCTTTGGGGATGAGGCTGTTCTCATTCACTCATCCGGTCACCCTGTTCCCACCGACGAGTGGGGTGTCACTCTCCACGCACTGCAGCATGGCGCTTATTATTATCTGGTTTGCATATTTAAGGAAGTGAGGCTGGAGGAGGATCACCGGAGTCAGATATAT 1212 0.4719 MSSSNRHWPSMFKSKPCNPHNQWQHDINSSLVSTGCQRSPYNSAAGGEERSPEPKPRWNPKPEQIRILETIFNSGMVNPPREEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNHNSAASLTQITPPSSSSSSSDKSSSKELVHPNGFSFGFSNINDAVPNSPTASVNQNYFHPHNHNDTNLLPPAAEPFSFPMQNNGQGAVTTNAMTTTLGFCFSDFSNNMMQSQPQCQQNAGPCTSLMINEIMNHGTSSKRDQDPDKAMKIPHHHPQHPQHPQLNFSLTSTPATTVIPPITNTPISVPCPITQLQGVCETASGGAKYTVFINDVPFEVAVGPINVRQVFGDEAVLIHSSGHPVPTDEWGVTLHALQHGAYYYLVCIFKEVRLEEDHRSQIY 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3920g00001 404 CDD homeodomain 54 116 IPR001356 GO:0003677
Mupr3920g00001 404 Gene3D - 55 121 - -
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 123 152 - -
Mupr3920g00001 404 SMART HOX_1 53 120 IPR001356 GO:0003677
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 259 284 - -
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 1 41 - -
Mupr3920g00001 404 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 115 152 - -
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 260 276 - -
Mupr3920g00001 404 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 387 IPR044557 GO:0003700|GO:0050793
Mupr3920g00001 404 FunFam WUSCHEL-related homeobox 11 55 122 - -
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 176 198 - -
Mupr3920g00001 404 MobiDBLite consensus disorder prediction 1 62 - -
Mupr3920g00001 404 SUPERFAMILY Homeodomain-like 50 119 IPR009057 -
Mupr3920g00001 404 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3920g00001 Mupr-Chr3920 4467 6621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3920g00001 1 389 Wox Gene Family AT2G33880 45.060 3.12e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr3920g00001 Homeodomain 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3920g00001 - - gmx:100777643 550.436