Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr388g00002 GTTGTCGGTGATGCAATTGTTGGTTTTGTGGTGAGAGAAGAAGAAGGTGTTGGGGGCAAAATTTGTCTTAGCTTTGTTTCTCTTGCTATTGTAATGGAACACGACTTAACGGGACAGCTTGTGGGTTCAGAGATACATGGGTTTCACACTTTGCAGGATTTGGATGTTAATGATACTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGTAATCACAAATATTTCAAGATCAATGCCAAGCCAGTGCATTTGCCTGAAAGTGGTACTATTGTACTATTTGACCGCAAGATGCTTAGGAACTTCAGAAAAGATGGACACAATTGGAAAAAGAAAAGTGATGGGAAAACTGTTAAAGAAGCTCATGAACACTTAAAAGTTGGCAATGAAGAAAGGATCCACGTATATTATGCACATGGCCAAGATAACCAAACCTTTGTCCGTAGATGTTATTGGTTGCTTGATAAGAGGCTAGAGCACATAGTCCTTGTTCATTATCGTGAAACACAAGAGTTGCAAGGTTCTCCTGTTACACCTGTAAATTCAAATTCAAGTTCTGCCTCTGATCCAATTGCATCTTTGATTCCATCAGAAGACTTAGATTCTGGGACAAATAGTTCTTACACTGTTGAGCTTAAAGACAATTTAACGGTCAAAAGTCATGAGCAGAGGCTTCATGAGATTAATACTCTTGAATGGGATGACCTATTGATTTCAAATGTCGACACTTCTACTACATCTAATGGAGACAATGTTCCATGTTCGTATCAACAAAATCAAAGTTTACTGAATGGCAGCCTTGGCATCGTATCCAGTAATCCTTCAGCAGAAATTCCTTCTTTTGGTAATTTAACTCAGCCAGTTTCTGGGAGCAATACTGTTCCTTACAGTTTACCAGAGAGTGTTGATCTTCTGAAAAATAGTCCTATATCTTCGGGTGGTGTTGACACCTTGGGCACTTTGGTCAATGAAGGCTTGCAAAGTCAGGACAGCTTTGGGATGTGGATGAACAACATCATATCGGATACACCATGTTCCATAGATGAGTCAGCTCTTGAAGCATCAATTCCTTTATCTGTTCACGAACCATATTCGTCACTGGTGGCAGATAATCAGCAATCTTCTCTTCCAGAACAAGTATTTAATCTCACTGAGGTGTCCCCTGCATGGGCATCTTCCACAGAGAAAACAAAGGTCCTGGTAACTGGATATTTTCATAATAACTATCAACACCTTGCAAAGTTCAACCTACTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAAATTGTTCAGGTTGGGGTTTACCGGTGCTGGGTATCACCACATTCTCCTGGATTGGTGAATCTCTATTTGAGCTTTGACGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAGTTTCGTACTCCTATTTTGCATGATCCCACTGCTTCAATGGAAGAGAAATACAACTGGGATGAGTTTCGACTTCAGATCAGGCTTGCTCATTTGCTCTTTGCTACAGAAAAGAGCCTCAACATTTTCTCAAGTAAAGTATCACCTAATGCACTGAAAGAGGCAAGGAGATTTTCCTTCAAAACATCATTTATCTCCAAAAGTTGGCAATACTTGATGAAGTCAGTTGACAACAAAAAAACTCCATTTTCACATGTAAAAGATGCCTTGTTTGAAATTTCATTGAAAAACAAGTTAAAGGAATGGCTTTTGGAACGAATTGTCTTAGGCAGCAAGACTATTGAATATGATGCACAAGGTCAAGGTGTAATTCATTTGTGCGCAATGCTGGGATATAATTGGGCAATTTCTTTATTTACTTGGTCAGGCTTGTCGTTGGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGAATGGAGAAAATGGTTGCAACTTTGATGTCTTGTGGGGCAAGGCCAAACTTGGTCACAGATCCAACTCCACAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTCTATGAAGGGATTTGATGGCTTAGCAGCTTACCTTTCTGAAAAGTCTCTGGTTGAGCAGTTCAATGATATGAGCTTAGCTGGAAATATCAGTGGCACACTGGAAACTAGCTCAACTGATCCAGTAAATTCTGAGAACCTTACCGAGGACCAACTGTACCTAAAGGAGACGTTGGCCGCTTACCGAACTGCTGCTGAGGCAGCAGCACGCATTCAAGCTGCATTTAGGGAGCATTCGCTAAAATTACGATTTCAGGGAGTTACCAGCCCAGAGGATGAAGCACGTCATATAGTAGCAGCAATGAGGATTCAACATGCCTTTCGCAACTATGAGTCAAGGAAAATGATGGCAGCTGCTGCTCGGATTCAGCTGAGGTTCCGTACATGGAAGTACCGCAGAGAATTTCTCCACAAGCGACGTCAGGCTATTAAAATTCAGGCTGCTTTTAGGGGCTTTCAAGCGAGGAGGCAATATTGTAAAATCATATGGTCTGTTGGGGTGCTCGAGAAAGTAATCCTGCGTTGGCTTTTAAAAAGAAAAGGCTTCCGTGGTCTCCAGGTTAATCCTGCCGAAGATGAGAAGGATGAAAATGGTGCAGAGGAGGACTTCTTTCGGACTGGCCGGAAACAGGCCGAAGATCGTGTCGAGAGGTCTGTCATACGTGTGCAGGCCATGTTCCGCTCTAAGAAAGCACAAGAAGACTATAGAAGGATGAAGCTGGCACATTATCAAGCAAAGCTGGATCTGGAATTAGAAGAATTCCTCAATTCTGAAGTTGAAACAGACAACAAAGGAGTTAGATGGAATAATGAATGA 2832 0.4174 VVGDAIVGFVVREEEGVGGKICLSFVSLAIVMEHDLTGQLVGSEIHGFHTLQDLDVNDTMEEAKSRWLRPNEIHAILCNHKYFKINAKPVHLPESGTIVLFDRKMLRNFRKDGHNWKKKSDGKTVKEAHEHLKVGNEERIHVYYAHGQDNQTFVRRCYWLLDKRLEHIVLVHYRETQELQGSPVTPVNSNSSSASDPIASLIPSEDLDSGTNSSYTVELKDNLTVKSHEQRLHEINTLEWDDLLISNVDTSTTSNGDNVPCSYQQNQSLLNGSLGIVSSNPSAEIPSFGNLTQPVSGSNTVPYSLPESVDLLKNSPISSGGVDTLGTLVNEGLQSQDSFGMWMNNIISDTPCSIDESALEASIPLSVHEPYSSLVADNQQSSLPEQVFNLTEVSPAWASSTEKTKVLVTGYFHNNYQHLAKFNLLCVCGDVSVPVEIVQVGVYRCWVSPHSPGLVNLYLSFDGHKPISQVVNFEFRTPILHDPTASMEEKYNWDEFRLQIRLAHLLFATEKSLNIFSSKVSPNALKEARRFSFKTSFISKSWQYLMKSVDNKKTPFSHVKDALFEISLKNKLKEWLLERIVLGSKTIEYDAQGQGVIHLCAMLGYNWAISLFTWSGLSLDFRDKFGWTALHWAAYNGMEKMVATLMSCGARPNLVTDPTPQNPGGCTAADLASMKGFDGLAAYLSEKSLVEQFNDMSLAGNISGTLETSSTDPVNSENLTEDQLYLKETLAAYRTAAEAAARIQAAFREHSLKLRFQGVTSPEDEARHIVAAMRIQHAFRNYESRKMMAAAARIQLRFRTWKYRREFLHKRRQAIKIQAAFRGFQARRQYCKIIWSVGVLEKVILRWLLKRKGFRGLQVNPAEDEKDENGAEEDFFRTGRKQAEDRVERSVIRVQAMFRSKKAQEDYRRMKLAHYQAKLDLELEEFLNSEVETDNKGVRWNNE 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr388g00002 943 ProSiteProfiles IQ motif profile. 810 834 IPR000048 GO:0005515
Mupr388g00002 943 SUPERFAMILY Ankyrin repeat 588 687 IPR036770 -
Mupr388g00002 943 ProSiteProfiles Ankyrin repeat region circular profile. 625 653 - -
Mupr388g00002 943 Pfam IQ calmodulin-binding motif 812 830 IPR000048 GO:0005515
Mupr388g00002 943 ProSiteProfiles IQ motif profile. 888 916 IPR000048 GO:0005515
Mupr388g00002 943 Gene3D - 545 688 IPR036770 -
Mupr388g00002 943 SMART iq_5 786 808 IPR000048 GO:0005515
Mupr388g00002 943 SMART iq_5 809 831 IPR000048 GO:0005515
Mupr388g00002 943 SMART iq_5 886 908 IPR000048 GO:0005515
Mupr388g00002 943 SMART iq_5 735 757 IPR000048 GO:0005515
Mupr388g00002 943 Gene3D Immunoglobulins 384 479 IPR013783 -
Mupr388g00002 943 Pfam Ankyrin repeats (3 copies) 574 654 IPR002110 GO:0005515
Mupr388g00002 943 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 55 916 - -
Mupr388g00002 943 SMART ANK_2a 664 695 IPR002110 GO:0005515
Mupr388g00002 943 SMART ANK_2a 625 654 IPR002110 GO:0005515
Mupr388g00002 943 ProSiteProfiles Ankyrin repeat profile. 625 657 IPR002110 GO:0005515
Mupr388g00002 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 734 837 IPR027417 -
Mupr388g00002 943 ProSiteProfiles IQ motif profile. 768 797 IPR000048 GO:0005515
Mupr388g00002 943 Gene3D - 786 834 - -
Mupr388g00002 943 FunFam calmodulin-binding transcription activator 5 555 695 - -
Mupr388g00002 943 ProSiteProfiles CG-1 DNA-binding domain profile. 56 182 IPR005559 GO:0003677
Mupr388g00002 943 SUPERFAMILY E set domains 389 476 IPR014756 -
Mupr388g00002 943 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Mupr388g00002 943 ProSiteProfiles IQ motif profile. 736 765 IPR000048 GO:0005515
Mupr388g00002 943 SMART CG_1_2 60 177 IPR005559 GO:0003677
Mupr388g00002 943 MobiDBLite consensus disorder prediction 181 213 - -
Mupr388g00002 943 FunFam Calmodulin-binding transcription activator 5 384 480 - -
Mupr388g00002 943 Pfam CG-1 domain 62 175 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr388g00002 Mupr-Chr388 7818 19094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr388g00002 60 920 CAMTA Transcription Factor Family AT3G16940 55.312 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mupr388g00002 Ank_2 3.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr388g00002 K21596 - gmx:100776839 1529.61