Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3889g00004 ATGAAAACCCGTTTCCTCTTTTCTCTCTTATTCTTCTTCACATTCACATTCTCCCATCTCAGCCCAACAACCACCGCAACCGCCGGCGACGATTCCGGCGACACCGACTTCATCCGCGCAAGCTGTAACACAACGCTATATCCGGACCTGTGCTTCGCCTCCCTCTCCCGCTTCGCCAGCACGGTGCAGCGCAGCCCCGCCGGCCTCGCCCGCGTCGCCGTGGCCGTCGCCCTCTCCAAGGCCCACGGCGCCGCAGCCTACCTCTCGCACCAGACCGCCGTCACCGCGGACGACGACGATTCCGGCGTCGGCGCCGCCCTCCACGACTGCTTTGCGAACCTGGAGGACGCGGTGGACGAGATCCGCGGGTCGCTGAAGCAGATTCGCGGGCTCAGACCGGAGGCGGACTCCGGTTCGGTCCGGTTCGGGCTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGCGGAGGGTCCCGTGAAGGCGAACGTATGCGATCGCGTCACCAGGGTGAAGAAGTTCACTAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGAATGCATGA 612 0.6356 MKTRFLFSLLFFFTFTFSHLSPTTTATAGDDSGDTDFIRASCNTTLYPDLCFASLSRFASTVQRSPAGLARVAVAVALSKAHGAAAYLSHQTAVTADDDDSGVGAALHDCFANLEDAVDEIRGSLKQIRGLRPEADSGSVRFGLSNVLTWMSAALTDEETCTDGFEGVAEGPVKANVCDRVTRVKKFTSNALALVNGFANKNA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3889g00004 203 Pfam Plant invertase/pectin methylesterase inhibitor 36 194 IPR006501 GO:0004857
Mupr3889g00004 203 CDD PMEI-like_3 40 200 - -
Mupr3889g00004 203 NCBIfam pectinesterase inhibitor domain 8 196 IPR006501 GO:0004857
Mupr3889g00004 203 SMART PMEI_2 33 194 IPR006501 GO:0004857
Mupr3889g00004 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 198 IPR035513 -
Mupr3889g00004 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 194 - -
Mupr3889g00004 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3889g00004 Mupr-Chr3889 21464 22371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3889g00004 35 197 Carbohydrate Esterase AT5G53370 28.485 3.31e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3889g00004 - - gmx:100797734 291.967