Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3888g00006 ATGGAGCATTTTGCTTGGTCACCAAGAAACGACAAAGGGAAACAGTTTCTAGCTTTTCCTTTGCTGATTAGTTTTTGTATGCTTGTGGCTCGAGGTATGGAATTGGAAACCCTCTACCCCCCTTGTTTTATGCCAAACTCAAATTGGTTTGTGCAAGAGAGCCAGAGCACAGAATGGACTAGAGAAGATAACAAGATGTTTGAAAGTGCCCTTGCTATATATGACAAGGACACCCCAGATAGATGGTTCAAGGTGGCAGCCATGATCCCTGGAAAGACTGTATTTGATGTGATCAAGCAGTATAGGGAATTGGAAGAAGATGTGAGTGAAATTGAAGCAGGGCGTGTTCCAATTCCTGGCTATCTTGCCTCTTCTTTCACCTTTGAGCTGGTTGACAACCACAACTATGATGGATGCAGAAGAAGGCCTGCTCCTGTCAGAGGTTCTGATCAAGAGAGAAAGAAAGGGGTCCCCTGGACTGAAGAGGAACACAGACGTTTTCTGATGGGACTTTTAAAGTATGGTAAAGGAGACTGGAGAAATATCTCTCGCAATTTTGTGGTCACAAAGACCCCCACCCAAGTTGCTAGCCATGCACAGAAGTACTACATAAGGCAAAAGGTATCTGGAGGGAAAGATAAAAGGAGACCTAGCATCCATGATATAACCACTGTTAATCTCACAGAAACTGCTGCATCAGATAGGAACAAGCCTCAGTTATTTAGTGTGTCTCCCATGGTTGAATCACAGCACAAGGTGAATAGCATGTCAAAAGTACAGCTGGACTGGACTAGCCACTACAATGATGGGTCACTCATGGTTTTCAACCCAAATAGTGATGACTTTTTTGTGTCATCCTCATCTGATATCACTTCCAAGGCCCTGAAAATGCAAGGGCAGGATCTCTATGACTGTGCTTTACATGAGGCTTATGCCAAGGTAAAAGTTCCAGGTTTCAGCATGGCTCCTAGAGACTTCAACAGTGAAGCTGTTTTTGGCATTCATGCACTGCAAGTTGACCATCTTAATTTGATTAGCATAACTTTAGTAGTCGAATCTGAGTTTGCATTCCACTTAGCTAGAATCCCATGCTTCATTGGCTCAGAATATAGGCAGATTCACAACCCAATAGCATATTCTAGCCCCATGCACATAATTTAG 1161 0.4324 MEHFAWSPRNDKGKQFLAFPLLISFCMLVARGMELETLYPPCFMPNSNWFVQESQSTEWTREDNKMFESALAIYDKDTPDRWFKVAAMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASSFTFELVDNHNYDGCRRRPAPVRGSDQERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLTETAASDRNKPQLFSVSPMVESQHKVNSMSKVQLDWTSHYNDGSLMVFNPNSDDFFVSSSSDITSKALKMQGQDLYDCALHEAYAKVKVPGFSMAPRDFNSEAVFGIHALQVDHLNLISITLVVESEFAFHLARIPCFIGSEYRQIHNPIAYSSPMHII 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3888g00006 386 CDD SANT 58 104 IPR001005 -
Mupr3888g00006 386 Gene3D - 51 118 - -
Mupr3888g00006 386 Gene3D - 157 208 - -
Mupr3888g00006 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 207 IPR017930 -
Mupr3888g00006 386 SUPERFAMILY Homeodomain-like 57 111 IPR009057 -
Mupr3888g00006 386 FunFam Transcription factor SRM1 51 118 - -
Mupr3888g00006 386 SMART sant 55 107 IPR001005 -
Mupr3888g00006 386 SMART sant 155 205 IPR001005 -
Mupr3888g00006 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 154 206 IPR006447 GO:0003677
Mupr3888g00006 386 SUPERFAMILY Homeodomain-like 153 207 IPR009057 -
Mupr3888g00006 386 Pfam Myb-like DNA-binding domain 158 202 IPR001005 -
Mupr3888g00006 386 FunFam transcription factor MYB1R1 157 208 - -
Mupr3888g00006 386 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 52 272 IPR043363 -
Mupr3888g00006 386 ProSiteProfiles SANT domain profile. 159 207 IPR017884 -
Mupr3888g00006 386 CDD SANT 158 202 IPR001005 -
Mupr3888g00006 386 ProSiteProfiles Myb-like domain profile. 151 203 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3888g00006 Mupr-Chr3888 28497 32055 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr3888g00006 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3888g00006 - - gmx:778039 564.303