Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3878g00001 ATGGAGTACAAAGTGAAAACCACAACATCTTCTCCACCAATCCCAATCCATGTTCCCACTATGCTCTCAAACTCTCCCCCATCTTCATCTTCTTCACCTCCCTCACAGTCTCCCACACCTTTCCCTTCACCCTCTCAGGGCTCTCCCTCCGCCGCTCCGCCGTCTCCTCCTCCCCCGCCTCCTCCTGTGGTGGTTAGCCCCTGTGCTGCTTGCAAGATCCTCCGTCGCAGGTGCGTGGAGAAGTGTGTGTTGGCTCCCTATTTCCCTCCCACTGATCCTCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTACCAGAATCCCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGTGCAGGTGCAATATGCCAACTTCAAAAGCAAGTTAGCGAGCTACAAGCACAGCTTGCCAAAGCACAAGCTGAGGTGGTGAACATGCAGTGCCAACAAGCTAATTTAGTGGCGCTAATTTGCATGGAAATGAGGCAATCACCGGACCAGCACATGCTTCAGCCTCAACCTCACGTTGATATGAGCTGCTTCATAGAGGACAACACTTTTGGCACTGCTTGGGAGCCTCTTTGGACATGA 663 0.5158 MEYKVKTTTSSPPIPIHVPTMLSNSPPSSSSSPPSQSPTPFPSPSQGSPSAAPPSPPPPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMRQSPDQHMLQPQPHVDMSCFIEDNTFGTAWEPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3878g00001 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 66 185 - -
Mupr3878g00001 220 MobiDBLite consensus disorder prediction 31 61 - -
Mupr3878g00001 220 Coils Coil 146 173 - -
Mupr3878g00001 220 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Mupr3878g00001 220 MobiDBLite consensus disorder prediction 1 61 - -
Mupr3878g00001 220 MobiDBLite consensus disorder prediction 1 30 - -
Mupr3878g00001 220 Pfam Lateral organ boundaries (LOB) domain 67 164 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3878g00001 Mupr-Chr3878 3606 4911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3878g00001 63 220 AS2 family AT1G07900 70.552 2.12e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr3878g00001 LOB 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3878g00001 - - gmx:100806667 334.724