Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr385g00001 ATGGCTCGACAATTGTGTGAAGACAAATCAAAGGACATGGGTTCATCAACCGGGTTCTTCTACTCAGATGTGTCATCTAATAACCCAAGTATTCAACCCCATATGATGAACCACATCCAAGGCTTTGTCACCGACCCAGAGATGTTCAACCTCACCACTGGCATGGAGATGATAGGGTTTTCCAAGAATCTTCAGCCACACAGTGAAAGCAACGGCGTCGTGTGGAAAAGTTTCTTCGGCAAACCAGGTCAACACGCGGGTCCTTCCTCTTCCAAAACGATGAACGAGTCTTCTAGCACTTTCTACAACCAGCATGGGCATGAGTATAACAACAAGCAAGACTTCACATCAGGGATTTCTGAGACAAGTAGCGAGAACTTAATCGTTGGTGGTGCCCATGATTCTTCCCCGTGGCAAGAGAACAGGTTAATGGTTGATGATTCTTCTTTAAGGTGCGTGTTCCCTTGTGAAAGTAACGAAAGGCCTAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCAGGTATTGGCTTGCAATCTTTTGAGCTGAGACAAACTAGCCATCATCAACAACATCATCCTGATTTTGTTTCAAGAGAGGGCTTTTTGGGAAAATCACTCAATGTTCAACAGCAACAACAAATGTTGCAAGATGGGGCGAATATTTATCAGGGACATTTCCTAATCAAGAGCTCCAAGTTCTTGGTGCCAGCACAGGTTCTTCTGAACGAGTTTTGTAGTCTAGGCCCAAAGGAAAATGATGCGCCAAAGCAAAAGTACTCTCAAAAGAACAAGCAGTGGGAAGAGGGTAATAACGGTGGCAGTTCCTCAAAGAACCATTCTCTCAGCTCTCTGGAGTTCGTGGAATTGCAGAAGAGAAAGACAAGGCTGCTCTCGATGCTGGAAGAGGTTGATAGAAGATACAAGCACTACTGTAACCAAATGAAGGCCGTGGTCTCCTCCTTTGAAGCAGTGGCGGGTAATGGGGCAGCCACAGTTTACTCGGCGTTGGCTTTGAGAGCCATGTCTAGACATTTTAGGTGTTTGAAGGATGGAATTATGGATCAAATTCAAGCCACGAGAAAAGCCATGGGAGAGAAAGATCCCGTTGCACCAGGCACAACAAGGGGCGAAACACCTAGGCTTAAAATCATTGACCAATCACTCAGACAACAAAGGGCCTTTCAGCAAATTAGCATGATGGAAACCCATCCTTGGAGACCCCAACGTGGCCTTCCCGAACGATCCGTTTCAGTTCTCCGCGCTTGGCTCTTCGAACACTTTCTCCATCCGTACCCAAGCGATGTTGATAAACATATTCTAGCCCGCCAAACCGGTCTCTCCAGAAGTCAGGCACGTGTTTCGAATTGGTTTATTAACGCGAGGGTGAGGCTGTGGAAGCCGATGGTGGAGGAAATGTACTTGGAAGAAGAGAAGGAGCAACAAAACGACGTAGCATCGTCCGAGGGAGGACACGCGAATCCCGAAGAGGATAAAAACGCATCGCCTTCAATAACGCGACGCGAGGATCAGAAGCCAACGCAGGCTCGACTCCTTCGAATCGACTCGGAGTGCGTGTCGTCCATTGTCAACAACCCGGATCACAAAAACGACACCAAGAGCGGCAAAACCATCCAAAACGACCACCAAGTTAATAATAATAATAATAATAATAATAATGATTCCGCGGACGCGTTCGGCTCGGTGGATCTTGACTTTTCGTCTTACTCCTCCGGGATGGTTCCTTACGGTGGTGTGTCGTTGACGCTAGGGTTACAACAGCACGGTGAAAGTGGGGTGAGTTTAGCGTTCCCGCCAGCAGCAACGCAGAGCTCGATGTTCTACCCACGGGACCAGATTGAAGAGTGTCAAACAGTTCAGTACTCTCTTTTGGATGGCGAAGGACAAAACATGCCGTATAGGAATCTCATGGGGACACAATTGCTTCATGATTTGGTATGA 1968 0.4731 MARQLCEDKSKDMGSSTGFFYSDVSSNNPSIQPHMMNHIQGFVTDPEMFNLTTGMEMIGFSKNLQPHSESNGVVWKSFFGKPGQHAGPSSSKTMNESSSTFYNQHGHEYNNKQDFTSGISETSSENLIVGGAHDSSPWQENRLMVDDSSLRCVFPCESNERPSQGLSLSLSSTNPSGIGLQSFELRQTSHHQQHHPDFVSREGFLGKSLNVQQQQQMLQDGANIYQGHFLIKSSKFLVPAQVLLNEFCSLGPKENDAPKQKYSQKNKQWEEGNNGGSSSKNHSLSSLEFVELQKRKTRLLSMLEEVDRRYKHYCNQMKAVVSSFEAVAGNGAATVYSALALRAMSRHFRCLKDGIMDQIQATRKAMGEKDPVAPGTTRGETPRLKIIDQSLRQQRAFQQISMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQARVSNWFINARVRLWKPMVEEMYLEEEKEQQNDVASSEGGHANPEEDKNASPSITRREDQKPTQARLLRIDSECVSSIVNNPDHKNDTKSGKTIQNDHQVNNNNNNNNNDSADAFGSVDLDFSSYSSGMVPYGGVSLTLGLQQHGESGVSLAFPPAATQSSMFYPRDQIEECQTVQYSLLDGEGQNMPYRNLMGTQLLHDLV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr385g00001 655 SMART prehox3 225 357 IPR006563 -
Mupr385g00001 655 MobiDBLite consensus disorder prediction 255 282 - -
Mupr385g00001 655 MobiDBLite consensus disorder prediction 479 519 - -
Mupr385g00001 655 MobiDBLite consensus disorder prediction 267 282 - -
Mupr385g00001 655 Pfam Associated with HOX 231 355 IPR006563 -
Mupr385g00001 655 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 135 496 - -
Mupr385g00001 655 MobiDBLite consensus disorder prediction 479 564 - -
Mupr385g00001 655 MobiDBLite consensus disorder prediction 546 564 - -
Mupr385g00001 655 SUPERFAMILY Homeodomain-like 409 476 IPR009057 -
Mupr385g00001 655 CDD homeodomain 408 471 IPR001356 GO:0003677
Mupr385g00001 655 Gene3D - 411 475 - -
Mupr385g00001 655 ProSiteProfiles 'Homeobox' domain profile. 405 470 IPR001356 GO:0003677
Mupr385g00001 655 Pfam Homeobox KN domain 425 466 IPR008422 GO:0003677|GO:0006355
Mupr385g00001 655 SMART HOX_1 408 474 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr385g00001 Mupr-Chr385 1451 4564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr385g00001 140 655 Homeobox Transcription Factor Family AT5G41410 47.743 3.50e-140 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr385g00001 - - gmx:100792789 1007.28