Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3856g00005 ATGGACCAGGCCGAATTAACCACCGAACAGGTTCTGAGGAGGGACATCCCATGGGAGACCTACATGTCCACGAAGCTAATCTCAGGCACCAGCCTTCAACTCTTGAGGCGTTTCGATCACCGATCAGAAAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCGGCTTATGTTCGCGTCTTCGTTCGTGTTTTGCGTGACATTTTCAAGGAAGATACTGTTGAGTATGTTTTGGCACTGATAGATGAAATGCTTGCAGCAAACCCAAAAAGAGGAAGACTGTTTCATGACAGTGCCCTTGCAGATGAAGATACTTATGAACCTTTCCTAAGTTATATTGCTCTGGAAAGGAAATTGGTTCATACAAGAGAAAATGTCAGGCCAAAAAATCAGAATGGCATTGTGTCAAATGGAGAAGCATCAAACGGAAAGAAGCCATTTACCACTATTGATGATGTTTTGATAGGATTGGTAAAATGGCTTTGTGAACAGTTGAAGAAACCTTCACATCCTATTCGCGGAGTCCCAACTGCTATCAATTGCCTATCAACACTACTCAAGGAACCTGTGGTTAGGTCTTCCTTTGTTCAGGCAGATGGGGTCAAGTTACTTGTGCCATTGATTTCACCAGCATCCACTCAACAGTCTATTCAGCTTCTTTATGAAACCTGTCTCTGCATATGGCTCTTATCCTATTATGAGCCAGCAATTGAATATTTGGCTACTTCAAGGACCCTTCCGCGACTTATTGATGTTGTTAAGAGCTCTACGAAAGAGAAGGTGGTTAGAGTTGTTGTCTTGACTCTTAAGAACTTAATGTCAAGAGGGACACTGGGTGCTCAGATGGTTGACCTTCAGCTGCCACAAGTTGTCCAGAGTTTAAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCCCTAGAAGAAGGGCTTAAAGATAATATTAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTCTTGGTCATCTGGATTGGTCTCCCATGCACAAAGATCCCTTATTCTGGCGAGAAAATATAACCAACTTTGAAGAAAATGATTTCCAGATCCTAAGGGTCCTAATAACAATTTTGGACACGTCCAGTGATCCAAGAAGTCTGGCAGTTGCTTGCTTTGACATTTCACAGTTTATCCAGAACCATCCTGCTGGACGGATCATTGTGACAGACCTTAAAGCCAAGGAACGAGTGATGAAACTTATGAACCATGAAAATGCGGAAGTTACTAAAAATGCACTGCTCTGCATCCAGCGGCTTTTCTTAGGTGCAAAACGTTAA 1317 0.426 MDQAELTTEQVLRRDIPWETYMSTKLISGTSLQLLRRFDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEDTVEYVLALIDEMLAANPKRGRLFHDSALADEDTYEPFLSYIALERKLVHTRENVRPKNQNGIVSNGEASNGKKPFTTIDDVLIGLVKWLCEQLKKPSHPIRGVPTAINCLSTLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVVVLTLKNLMSRGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPLFWRENITNFEENDFQILRVLITILDTSSDPRSLAVACFDISQFIQNHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3856g00005 438 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 434 IPR004908 GO:0000221|GO:0046961|GO:1902600
Mupr3856g00005 438 Coils Coil 433 438 - -
Mupr3856g00005 438 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 390 397 IPR018506 GO:0020037
Mupr3856g00005 438 SMART arm_5 187 232 IPR000225 GO:0005515
Mupr3856g00005 438 SMART arm_5 394 434 IPR000225 GO:0005515
Mupr3856g00005 438 SMART arm_5 233 274 IPR000225 GO:0005515
Mupr3856g00005 438 PIRSF V-ATP_synth_H 1 438 IPR004908 GO:0000221|GO:0046961|GO:1902600
Mupr3856g00005 438 SUPERFAMILY ARM repeat 8 434 IPR016024 -
Mupr3856g00005 438 Gene3D - 335 436 IPR038497 -
Mupr3856g00005 438 Pfam V-ATPase subunit H 321 433 IPR011987 GO:0000221|GO:1902600
Mupr3856g00005 438 Gene3D - 4 323 IPR011989 -
Mupr3856g00005 438 FunFam V-type proton ATPase subunit H 335 436 - -
Mupr3856g00005 438 Pfam V-ATPase subunit H 4 315 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3856g00005 Mupr-Chr3856 32884 40872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3856g00005 1 437 Primary Pumps ATPases(2) AT3G42050 75.281 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3856g00005 K02144 - gmx:100788723 790.03