Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3856g00004 ATGACCATGCTACATGTGAAGATTGAACTTGAGGAAGAGGTTTTGCCCACCTGCAGAAAAAAATCTTGCATGGGTTGGTTTACTAAGTTGCTTAAGGGATCCAACCGTAAATCTTCAGGAGGAAGATATCACGGGAAATATGGAGATGACAGAATTTCGGACAATCATAATGATTCAGCGGACGATTTGACAGATATAGAAAAAGAAGAAATTGATCGTGCAATAGCGCTCTCTCTTTCAGAGGCAGATCAGAAAGGTAAAAAAGTTATTGGTGAGATTATGATTTTGCTGATGGGTGGCCTCATGTTTTTGCCTCACAATGCCCCAGAGGACGACTCTGAATCTGAAGATGATGAACTGTGTCCACTTGATGATGAGGAAGATGAATGTGATAGTGAAGTTCAGCAAGATGAAGATGACCATGTTGCTAAAGTTCAACAGGATGAAGACAAACATCTTGATGAAGTTCAACTAGAGGAAGATGAACAACTTGCCAGGGCAATTCAAGAAAGTTTGAGCATTAGTTCTCCTCCTCGATCTGACACAGATTCTTTATTACAACCTTTTGCACACCTCTTCCCACCTGTATACAGAATCTGTGCTGGCTGCAATGCCGAGATTGGCAATGGAAGATTTTTGAGTTGCATGGGAGGTTTCTGGCATCCAGAATGTTTTTGTTGCCAGGCTTGCAAACTGCCAATCACTGATTATGAGTTTTCCATGTCTGGAAATCACCGGTATCATAAATCCTGCTATAAGGAGTTGCATCATCCGAAATGTGATGTTTGCAAGAACTTTATCCCACCAAATTCAGCTGGCCTCATTGAGTATAGAGCACATCCTTTCTGGCTACAAAAATATTGTCCATCACATGAGCACGACGGCACTCCTCGTTGTTGTAGTTGTCAAAGAATGGAGGTCAGTTATATGAGCTCCCAAAACATTTCATCCTTTATTGCTACCAACAAGGAGATACTGATGTATCCCATCTCTGTTTTTGTCTTTTTCCTTTTCATATCTGATAATGAAACTTTCCAATCAGTGCAGTCAGTGGATGCCAAATATCTGTTACTTGATGATGGTCGAAAGCTGTGTCTGGAGTGCCTTGACTCATCTATCATGGATACTCATGAATGCCAACCTCTCTACGTCGAAATACAAGAATTTTATGAAGGTTTACATATGAAGATAGAGCAGCAAATTCCTATGCTTTTGGTTGAGAGACAAGCGCTGAACGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTACCTGAAACTAGAGGACTTTGCTTGTCCGAAGAGCAAACTATCCCCACTATTTTAAGGAGACCAAGGATAGGGGCAGGATACCAGCTAATAGATATGATAACTGAGCCTTTTAGGCTGATTCGTCGTTGCGAAGTGACAGCCATACTTGTTTTGTATGGCCTTCCTAGGTTATTGACAGGATCAATCCTGGCTCATGAAATGATGCATGCATGGCTTAGGCTTAAAGGCTATGGCAATCTGAGGCCAGAAGTTGAAGAGGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGATTCAGAGACCTATTCTGGATCTGGGAATGATGGTGCATCATCATCATCATCATCATCATCATCTTCATCTTCCCCATCCTCTTCATCATCTTCATCCTCTTCGTCATCAAAGAAGGGTAAACGGTCTGACTTTGAGAAGGAACTTGGTAAGTATTTCAAACACCAGATTGAGTCAGATAGCTCACCAGCTTATGGAGATGGATTCAGACAGGGTAACCAGGCTGTGCTTAAGTATGGACTTAAAAGGACCCTTGACCATATCCGAATGACAGGAAGTTTTCCATAT 1854 0.4191 MTMLHVKIELEEEVLPTCRKKSCMGWFTKLLKGSNRKSSGGRYHGKYGDDRISDNHNDSADDLTDIEKEEIDRAIALSLSEADQKGKKVIGEIMILLMGGLMFLPHNAPEDDSESEDDELCPLDDEEDECDSEVQQDEDDHVAKVQQDEDKHLDEVQLEEDEQLARAIQESLSISSPPRSDTDSLLQPFAHLFPPVYRICAGCNAEIGNGRFLSCMGGFWHPECFCCQACKLPITDYEFSMSGNHRYHKSCYKELHHPKCDVCKNFIPPNSAGLIEYRAHPFWLQKYCPSHEHDGTPRCCSCQRMEVSYMSSQNISSFIATNKEILMYPISVFVFFLFISDNETFQSVQSVDAKYLLLDDGRKLCLECLDSSIMDTHECQPLYVEIQEFYEGLHMKIEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTIPTILRRPRIGAGYQLIDMITEPFRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYGNLRPEVEEGICQVLAHMWLDSETYSGSGNDGASSSSSSSSSSSSPSSSSSSSSSSSKKGKRSDFEKELGKYFKHQIESDSSPAYGDGFRQGNQAVLKYGLKRTLDHIRMTGSFPY 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3856g00004 618 Gene3D Cysteine Rich Protein 196 258 - -
Mupr3856g00004 618 ProSiteProfiles LIM domain profile. 198 258 IPR001781 -
Mupr3856g00004 618 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 159 178 IPR003903 -
Mupr3856g00004 618 MobiDBLite consensus disorder prediction 42 58 - -
Mupr3856g00004 618 SMART uim 159 178 IPR003903 -
Mupr3856g00004 618 SMART uim 66 85 IPR003903 -
Mupr3856g00004 618 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 196 225 - -
Mupr3856g00004 618 Pfam LIM domain 200 254 IPR001781 -
Mupr3856g00004 618 CDD LIM_DA1 200 252 - -
Mupr3856g00004 618 FunFam Protein DA1-related 1 194 253 - -
Mupr3856g00004 618 Pfam Protein DA1 392 613 IPR022087 -
Mupr3856g00004 618 ProSitePatterns LIM zinc-binding domain signature. 200 234 IPR001781 -
Mupr3856g00004 618 MobiDBLite consensus disorder prediction 531 560 - -
Mupr3856g00004 618 MobiDBLite consensus disorder prediction 531 565 - -
Mupr3856g00004 618 MobiDBLite consensus disorder prediction 35 58 - -
Mupr3856g00004 618 PANTHER PROTEIN DA1-RELATED 2 24 618 IPR045218 -
Mupr3856g00004 618 SMART lim_4 199 251 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3856g00004 Mupr-Chr3856 20960 25860 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr3856g00004 DA1-like 2.8e-104 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3856g00004 - - gmx:100806605 906.36