Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr384g00004 CCACACAACTTATCTTGTAGGTCCCACGAAGTCTCTACCTTTCCAATTCGCAGTGCCATAAAAGCTGACCTTTATGCTAAGCCTAGTTCCCACCCACAGACGCGCGCAGACGCAGAGTGGGTAAAGCAAAATCATGAACACAAACCAGCGTTCCCTGCACCCGTTCTCTTGTTAGTTTATTCATATTTGCATTCCTCTCCACTTGCACATTCATTCAATTCAATGGCCGTTACATCCCTCTCTCTGCTCCCTCCCTCGACTTGTCCATGCTTCTGTGGCGCCATCCATCTCCGCTCCCACAACAGCTTCATTTCCATCCACTCCCCTTCTTCTCCCTTCCCTTCTTTCTCCTCAATTTCAAATCCCAACTTCGCTCCCACGCGCCGCCGTTTTCACACTGTCCTCGCCGCTTCCTCCGACTACTATGCCACTCTCGGAATCCCCAAATCCGCCACCGGCAAGGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGACGTAAACAAGGAGCCCGGGGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCGTATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGTGAGGCAGGAGTTAGGAGTGCAGTTGGAGGAGGCTCAAGTGCTTATACGACAAATCCATTTGATTTATTTGAGACATTTTTCGGGCCAACCATGGGTGGCTTTGCTGGCATGGATCCAACTGGATTTGGAACTCGTCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGATTTTTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGATCTTTCTCATTTGGAAACATGTGAAGTCTGTACTGGTACCGGAGCAAAGGTAGGCTCCAAGATGAGAGTATGTTCAACTTGTGGTGGGAGGGGCCAGGTGATGAGGACTGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGGATGGTGAAGTCATATCTGAGTATTGTCGTAAATGCAATGGTGAAGGACGAATACGGGTTAAGAAAAATATTAAAGTCAAAGTTCCTCCTGGTGTTAGCTCAGGCAGTATTCTAAGAGTTTCCGGGGAGGGTGATGCTGGACCTAGAGGGGGCCCTCCAGGAGATCTTTATGTATATCTTGATGTGCAAGAGATACCTGGAATTCAAAGAGATGACATTAATCTCTGCTCAACAATATCAATAAGTTATCTAGATGCTATACTGGGGTCTGTTGTCAAGGTAAAGACAGTTGAAGGAATTTCGGAACTACAAATACCTGCTGGTACCCAACCTGGAGATGTCCTTGTCCTTGCAAGAAAAGGTGTACCAAAATTAAATAAACCATCAATACGTGGCGACCACTTATTTACAGTTAAAGTTACAATACCAAAACGGATTAGTACAAAGGAGCGTGAATTGCTTGAAGAACTTGCTTCTCTAGGTGACACAAGCAGACGATCAAAACCCCGTCCTAGGACTCACTCTTCAAGTGGTACGGAAGGTCCTTCAGCTCAAAAGGATGAAAGTCCAACAGCAACAGTTGAAGAAAAAACTGAAAAATCAGAAGATGAAAACGATGTATGGAATAAATTGAAGGACTTTGCTGGATCTGTGGCAAATGGAGCTTTAAAGTGGCTGAAAGATAATCTCTAG 1698 0.4511 PHNLSCRSHEVSTFPIRSAIKADLYAKPSSHPQTRADAEWVKQNHEHKPAFPAPVLLLVYSYLHSSPLAHSFNSMAVTSLSLLPPSTCPCFCGAIHLRSHNSFISIHSPSSPFPSFSSISNPNFAPTRRRFHTVLAASSDYYATLGIPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVRSAVGGGSSAYTTNPFDLFETFFGPTMGGFAGMDPTGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFDLSHLETCEVCTGTGAKVGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVKKNIKVKVPPGVSSGSILRVSGEGDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLCSTISISYLDAILGSVVKVKTVEGISELQIPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELASLGDTSRRSKPRPRTHSSSGTEGPSAQKDESPTATVEEKTEKSEDENDVWNKLKDFAGSVANGALKWLKDNL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr384g00004 565 Gene3D - 403 495 - -
Mupr384g00004 565 ProSiteProfiles Zinc finger CR-type profile. 274 356 IPR001305 GO:0031072|GO:0051082
Mupr384g00004 565 SUPERFAMILY Chaperone J-domain 136 246 IPR036869 -
Mupr384g00004 565 PRINTS DnaJ domain signature 196 215 IPR001623 -
Mupr384g00004 565 PRINTS DnaJ domain signature 142 160 IPR001623 -
Mupr384g00004 565 PRINTS DnaJ domain signature 160 175 IPR001623 -
Mupr384g00004 565 PRINTS DnaJ domain signature 176 196 IPR001623 -
Mupr384g00004 565 MobiDBLite consensus disorder prediction 509 524 - -
Mupr384g00004 565 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 398 IPR008971 GO:0006457|GO:0051082
Mupr384g00004 565 Pfam DnaJ domain 140 201 IPR001623 -
Mupr384g00004 565 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 108 503 - -
Mupr384g00004 565 Pfam DnaJ central domain 287 351 IPR001305 GO:0031072|GO:0051082
Mupr384g00004 565 CDD DnaJ 140 193 IPR001623 -
Mupr384g00004 565 Gene3D - 287 351 - -
Mupr384g00004 565 MobiDBLite consensus disorder prediction 525 541 - -
Mupr384g00004 565 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 274 354 IPR036410 -
Mupr384g00004 565 SMART dnaj_3 139 196 IPR001623 -
Mupr384g00004 565 CDD DnaJ_zf 287 351 IPR001305 GO:0031072|GO:0051082
Mupr384g00004 565 Gene3D - 257 393 - -
Mupr384g00004 565 FunFam Chaperone protein dnaJ A6 chloroplastic 287 351 - -
Mupr384g00004 565 Hamap Chaperone protein DnaJ [dnaJ]. 137 549 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr384g00004 565 SUPERFAMILY HSP40/DnaJ peptide-binding domain 404 489 IPR008971 GO:0006457|GO:0051082
Mupr384g00004 565 FunFam Putative Mitochondrial DnaJ chaperone 346 393 - -
Mupr384g00004 565 FunFam Chaperone protein dnaJ A6 chloroplastic 137 243 - -
Mupr384g00004 565 NCBIfam molecular chaperone DnaJ 140 494 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr384g00004 565 Pfam DnaJ C terminal domain 260 478 IPR002939 -
Mupr384g00004 565 FunFam Molecular chaperone Hsp40/DnaJ family protein 403 495 - -
Mupr384g00004 565 CDD DnaJ_C 258 481 - -
Mupr384g00004 565 Gene3D DnaJ domain 137 242 IPR036869 -
Mupr384g00004 565 ProSiteProfiles dnaJ domain profile. 140 204 IPR001623 -
Mupr384g00004 565 ProSitePatterns Nt-dnaJ domain signature. 181 200 IPR018253 -
Mupr384g00004 565 MobiDBLite consensus disorder prediction 493 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr384g00004 Mupr-Chr384 19918 29348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr384g00004 141 247 C2H2 Transcription Factor Family AT1G74250 39.496 4.92e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr384g00004 K03686 - gmx:100798567 866.3