Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3843g00006 ATGGAACGCACCCTTGGTGGCAAGTACAAGCTCGGCCGCAAGATCGGAAGTGGATCATTCGGCGAAATCTACCTCGCGACGCATATTGACACCTTCGAGATCGTCGCCGTCAAGATCGAGAATAGTAAAACAAAGCATCCACAACTGCTTTACGAGGCAAAGCTCTACAACATTCTTCAAGGAGGAAGTGGCATTCCGAACATAAAATGGTCTGGCATAGATGGGGAGGATAATGTGCTTGTTCTTGATTTGCTTGGGCCGAGTCTTGAGGATCTTTTTGTGTATTGTGGAAGGAAGTTTTCATTGAAGACAGTATTATTGTTGGCTGATCAGATGATCACTAGAATAGAATATGTGCACTCTAAAGGATTTTTACATAGGGATATTAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCCAACCAGGTTTACATAATTGATTTTGGACTTGCAAAACGATACCGGGATTCCACTACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACGGGTACTGCCCGATATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTCGACGGGATGATTTAGAATCCCTAGGATATGTACTTCTGTACTTCCTCAGAGGAAGCCTCCCTTGGCAAGGTCTAAAGGCTGCTACAAAGAAACAAAAATATGATAAAATATGTCAGAAGAAGTTATCAACTCCTATTGAGGTACTATGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGGATTCTTGAAGCGCCTATTTCGGGACCTATTTGCTCGAGAAGGTTATGAATTTGATTATGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCTCAAAAGAATGTAGTGCTCCCTCCATTATCTCCAGTTCCAGGTGCAAGTAACAGTCGTGTAATTCCAATAGATACTGACAACCATCAAGGTCTTAATGCATTTTCAGGGCATGTTAAAGAGCGTATTAGAGCAGGCGATGTTACTGGTTCTGGTGTTAAAATTCAGTTTAAATCACCAGTGGGTAAAAATTTGGGTTATGAGAATCCACTTGACAAAAATATTTTTGGAGAAGCAAATATACCCTCTACTTCATATTCTCCTCCTAGTACTTCAAAAAGGAACTCAGTGAAGCCATCCTTGTCTGCTGAAGCTTCCAACCCTGGACATGGGCAAGGCAGTAAAATTGGTCCTTCAAGTAGCTGGATGTCATCTCTGCAGCGCATTTCTTCTGCTAAATGA 1293 0.4161 MERTLGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPNIKWSGIDGEDNVLVLDLLGPSLEDLFVYCGRKFSLKTVLLLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICQKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYEFDYVFDWTILKYQQSQKNVVLPPLSPVPGASNSRVIPIDTDNHQGLNAFSGHVKERIRAGDVTGSGVKIQFKSPVGKNLGYENPLDKNIFGEANIPSTSYSPPSTSKRNSVKPSLSAEASNPGHGQGSKIGPSSSWMSSLQRISSAK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3843g00006 430 CDD STKc_CK1_delta_epsilon 8 282 - -
Mupr3843g00006 430 MobiDBLite consensus disorder prediction 377 430 - -
Mupr3843g00006 430 PANTHER CASEIN KINASE-RELATED 7 374 - -
Mupr3843g00006 430 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3843g00006 430 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mupr3843g00006 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3843g00006 430 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3843g00006 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mupr3843g00006 430 FunFam Casein kinase I isoform delta-like 1 339 - -
Mupr3843g00006 430 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Mupr3843g00006 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3843g00006 Mupr-Chr3843 48741 52350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3843g00006 9 234 EF-hand Containing Proteins AT4G23650 28.879 1.09e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr3843g00006 Pkinase 7.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3843g00006 K08960 - gmx:100800342 829.32