Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3840g00004 ATGAATATTGACAATTATGATGATCTTCTTGATACATTTCTTGATTACCATTACCATGAATATTTAGAGTGTGGGGAAAAGAGGGACTATGAGATAGACGATGATGATTGCTGGAAAGAAGAGGATGAACTACTTGCAATTACAGAGAGTATTATCACAAGGAAAATATACACATCCAGAGAAAAGATTTCTTTACAAGGTCAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGAGAAGCGTACGGTTCGTTTTCTGGCAAGGTCTTTTGCTGTAACTGGAAATCATCTTGGTCAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCAGTGACAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCAGTCCTTCAATTAATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGACAGCAAGACAATGAACAAGCTGTTGCCGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAAAAATTGGTTGTTGATTTGAAGGGCCGTGTTAAATTGAAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATAGCGTGGGTCTGTGATCAGGATGCATATGCTTGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCGTTGCTATCCAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGATAATCGGCCCAGTCCTCACAGTAACGACTGACTCGATTCTAGAGCACGTGAATAAATTGCTTGAGATACCAGGATCAAAGCTCCTCTTTGGGGTCGACCTCTGGAGGATCATTCAATTCCACCTATTTATGGATAAGAATTTTGAGCTTGTGACTAAAAATATTCGGACCATTCCAGATTATTACCGATTACAAGAGCAGTCAACTATCAGTTGTATTGGATGCCCTGGAAAGAATGATGTTATTGGAAAATCAGTAAATGGCACTACTTATGCTGGGCTAAGAGCAAGTACAACCGGAGCTCCACAGAATCACTGGTTTGGACCTGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACTAGAGGCTATAAAACTTGTATGGTCTTGTCATAGAGAAATTATGTACGATCTGGGACCTGTGCCAAATAATTGGGAAATTCCTCCGTCCACTTGA 1215 0.4082 MNIDNYDDLLDTFLDYHYHEYLECGEKRDYEIDDDDCWKEEDELLAITESIITRKIYTSREKISLQGQYKEFLQRVTSRLLEKRTVRFLARSFAVTGNHLGQQSHGFRWPYGPVTIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKTMNKLLPEANPRMTLFTGSSRVAEKLVVDLKGRVKLKDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLEDLIIGPVLTVTTDSILEHVNKLLEIPGSKLLFGVDLWRIIQFHLFMDKNFELVTKNIRTIPDYYRLQEQSTISCIGCPGKNDVIGKSVNGTTYAGLRASTTGAPQNHWFGPAGDARGAGIGTLEAIKLVWSCHREIMYDLGPVPNNWEIPPST 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3840g00004 404 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 213 224 IPR016160 GO:0016491
Mupr3840g00004 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 188 274 IPR016163 GO:0016620
Mupr3840g00004 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 39 148 IPR016162 GO:0016491
Mupr3840g00004 404 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 150 187 IPR016162 GO:0016491
Mupr3840g00004 404 Pfam Aldehyde dehydrogenase family 101 149 IPR015590 GO:0016491
Mupr3840g00004 404 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 332 404 IPR044638 GO:0004029
Mupr3840g00004 404 SUPERFAMILY ALDH-like 99 284 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3840g00004 Mupr-Chr3840 46052 48400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3840g00004 76 404 Aldehyde Dehydrogenase Gene Family AT5G62530 61.307 3.31e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3840g00004 K00294 - gmx:100806579 495.738