Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3840g00003 ATGGCATCTTTCACTTGGTCTGCACCTTCACCTATTGGCAAGAAGAAAGTTCTGTTCATAATGGGTGCAACTGGGACGGGCAAAACCAAACTTTCAATCAAGTTGGGCACTGAATTTCCTTCTGAAATCATTAACTCAGACAAAATTCAAGTCTACAAAGGCCTTGACATCATCACCAACAAGGTGCCAGAGTCTGAACGTTGTGCCGTTCCTCATCACTTGCTTGGCATCATCGACGATCCTGATTATGACTTTACCATTGAGGACTTTTGCAAGCATGTCCTCATTGCTCTTGATCTCATAATAAAAAATGGACGCTTACCCATTATCGTGGGAGGCTCAAACACTTACCTCACAACATTAGTTGAGGATCCCAATATCGCATTTCGCTCCAAATATGACTGTTGCTTCATCTGGCTCGATGTGTCTTTGCCTGTCCTTTTTCATTATTTAGATAAAAGGGTGGATGAAATGTTTGATGCAGGAGCTGTAGATGAGATTCGAGAAACCTTTATGCTTGGAGCAGATTACTCTCGTGGGGTTAAAAGAGCCATTGGGGTTCCTGAGTTGGGAGAGTATTTTCTAGTAGAGAAGGAAATAGATGACAAAGCTCAAAAAGAGAAGATGCTACAACATGCCATTGCAAAAACTAAAAAGAACACTTGTAAGTTGGCTGAGATCCAACTTTTGAAGATCCATAAGATGAACTATGAGCTTGGATGGAGAATGACCAAAATTGATTCCACTCCGGTGTTTGAGGCTGTTTTAAAAGGAGTGAGTTATGAGCAATTATACCAAGAAATTGTGTTCAAACCAAGCATGGAGGCAGTGAAAAGATTTCTAGAGGAGACAACTCAGGAATTGGGAAAGACACCATGCCAAAATGGTGAACAACTGACAATTTGTGCTTAA 912 0.4101 MASFTWSAPSPIGKKKVLFIMGATGTGKTKLSIKLGTEFPSEIINSDKIQVYKGLDIITNKVPESERCAVPHHLLGIIDDPDYDFTIEDFCKHVLIALDLIIKNGRLPIIVGGSNTYLTTLVEDPNIAFRSKYDCCFIWLDVSLPVLFHYLDKRVDEMFDAGAVDEIRETFMLGADYSRGVKRAIGVPELGEYFLVEKEIDDKAQKEKMLQHAIAKTKKNTCKLAEIQLLKIHKMNYELGWRMTKIDSTPVFEAVLKGVSYEQLYQEIVFKPSMEAVKRFLEETTQELGKTPCQNGEQLTICA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3840g00003 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 175 IPR027417 -
Mupr3840g00003 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 243 - -
Mupr3840g00003 303 Gene3D - 14 281 IPR027417 -
Mupr3840g00003 303 Pfam IPP transferase 50 124 - -
Mupr3840g00003 303 Pfam IPP transferase 130 229 - -
Mupr3840g00003 303 FunFam Adenylate isopentenyltransferase 5, chloroplastic 144 243 - -
Mupr3840g00003 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 14 281 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3840g00003 Mupr-Chr3840 33612 34523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3840g00003 98 292 C2H2 Transcription Factor Family AT2G27760 31.222 3.75e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3840g00003 K10760 - gmx:121173984 534.258